Variant report

Variant rs2916076
Chromosome Location chr19:19545990-19545991
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19518600-19549800 Weak transcription Fetal Brain Female brain
2 chr19:19520800-19546800 Weak transcription Hela-S3 cervix
3 chr19:19522200-19548600 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr19:19522200-19563400 Weak transcription Placenta Amnion Placenta Amnion
5 chr19:19530200-19547400 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr19:19534800-19548400 Weak transcription HSMM muscle
7 chr19:19537000-19546800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr19:19537000-19549000 Weak transcription Brain Germinal Matrix brain
9 chr19:19537200-19549200 Weak transcription H1 Cell Line embryonic stem cell
10 chr19:19537800-19549800 Weak transcription A549 lung
11 chr19:19538000-19546800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr19:19538200-19546800 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr19:19538200-19554800 Weak transcription H9 Cell Line embryonic stem cell
14 chr19:19538400-19555000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr19:19538400-19555200 Weak transcription Primary hematopoietic stem cells blood
16 chr19:19538400-19555800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr19:19538400-19556800 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr19:19538400-19556800 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr19:19539400-19547000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr19:19539800-19555000 Weak transcription Stomach Mucosa stomach
21 chr19:19540000-19546800 Weak transcription Primary monocytes fromperipheralblood blood
22 chr19:19540200-19548400 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr19:19540200-19555400 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr19:19540200-19562600 Weak transcription Fetal Intestine Large intestine
25 chr19:19540800-19549000 Weak transcription Esophagus oesophagus
26 chr19:19541400-19548600 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr19:19541600-19546800 Weak transcription Fetal Stomach stomach
28 chr19:19542600-19546200 Enhancers Right Ventricle heart
29 chr19:19542600-19547800 Enhancers Left Ventricle heart
30 chr19:19542800-19546000 Enhancers Fetal Muscle Leg muscle
31 chr19:19543200-19546000 Enhancers Primary T helper naive cells from peripheral blood blood
32 chr19:19543400-19546200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr19:19543400-19547200 Strong transcription Primary T cells from cord blood blood
34 chr19:19543400-19549000 Strong transcription Primary hematopoietic stem cells short term culture blood
35 chr19:19543400-19550800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr19:19543600-19546000 Enhancers Pancreas Pancrea
37 chr19:19543600-19546200 Enhancers Ovary ovary
38 chr19:19543600-19546400 Enhancers Right Atrium heart
39 chr19:19543600-19548400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr19:19543800-19546600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr19:19543800-19547000 Strong transcription K562 blood
42 chr19:19544000-19546200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr19:19544000-19546200 Enhancers Colon Smooth Muscle Colon
44 chr19:19544000-19546800 Weak transcription Thymus Thymus
45 chr19:19544000-19549200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr19:19544000-19551000 Strong transcription Dnd41 blood
47 chr19:19544200-19546000 Enhancers Fetal Heart heart
48 chr19:19544200-19546800 Weak transcription Primary B cells from peripheral blood blood
49 chr19:19544200-19555800 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr19:19544400-19546200 Enhancers Fetal Muscle Trunk muscle

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