Variant report

Variant rs10405625
Chromosome Location chr19:19579046-19579047
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19575600-19581600 ZNF genes & repeats GM12878-XiMat blood
2 chr19:19575800-19579600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr19:19575800-19579800 ZNF genes & repeats Dnd41 blood
4 chr19:19575800-19580000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
5 chr19:19575800-19580600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
6 chr19:19575800-19580800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
7 chr19:19575800-19581600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr19:19576000-19579200 Strong transcription Stomach Smooth Muscle stomach
9 chr19:19576000-19579800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr19:19576200-19579600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr19:19576200-19580000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr19:19576200-19580200 ZNF genes & repeats Thymus Thymus
13 chr19:19576200-19580600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr19:19576200-19580800 ZNF genes & repeats Primary B cells from cord blood blood
15 chr19:19576400-19579200 ZNF genes & repeats H9 Cell Line embryonic stem cell
16 chr19:19576400-19580000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
17 chr19:19576400-19580600 ZNF genes & repeats Primary hematopoietic stem cells blood
18 chr19:19576400-19580600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
19 chr19:19576400-19580600 ZNF genes & repeats Fetal Thymus thymus
20 chr19:19576600-19580600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr19:19576600-19580800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr19:19576800-19579400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr19:19576800-19579800 ZNF genes & repeats K562 blood
24 chr19:19576800-19579800 ZNF genes & repeats NHDF-Ad bronchial
25 chr19:19576800-19580800 ZNF genes & repeats Fetal Intestine Small intestine
26 chr19:19577000-19579400 ZNF genes & repeats Primary monocytes fromperipheralblood blood
27 chr19:19577000-19579800 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
28 chr19:19577000-19579800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
29 chr19:19577000-19580000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr19:19577000-19580400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
31 chr19:19577200-19580200 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
32 chr19:19577200-19580200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
33 chr19:19577200-19580200 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
34 chr19:19577200-19580600 ZNF genes & repeats Fetal Stomach stomach
35 chr19:19577400-19579800 ZNF genes & repeats Primary T cells from cord blood blood
36 chr19:19577400-19579800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr19:19577400-19579800 ZNF genes & repeats Brain Germinal Matrix brain
38 chr19:19577400-19580400 ZNF genes & repeats Primary T cells effector/memory enriched fromperipheralblood blood
39 chr19:19577400-19580600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
40 chr19:19577600-19579400 ZNF genes & repeats NHEK skin
41 chr19:19577600-19579800 ZNF genes & repeats H1 Cell Line embryonic stem cell
42 chr19:19577600-19579800 ZNF genes & repeats Brain Hippocampus Middle brain
43 chr19:19577600-19579800 ZNF genes & repeats Duodenum Mucosa Duodenum
44 chr19:19577600-19579800 ZNF genes & repeats A549 lung
45 chr19:19577600-19579800 ZNF genes & repeats HMEC breast
46 chr19:19577600-19579800 ZNF genes & repeats NHLF lung
47 chr19:19577600-19580000 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
48 chr19:19577600-19580000 ZNF genes & repeats Fetal Muscle Trunk muscle
49 chr19:19577600-19580400 ZNF genes & repeats Primary B cells from peripheral blood blood
50 chr19:19577600-19580600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell

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