The 2.0 version of rSNPBase

Variant report

Variant rs2163805
Chromosome Location chr19:19575945-19575946
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19567000-19576200 Enhancers Gastric stomach
2 chr19:19567000-19576600 Genic enhancers Fetal Intestine Small intestine
3 chr19:19567200-19576000 Enhancers Fetal Intestine Large intestine
4 chr19:19568600-19576000 Enhancers Fetal Lung lung
5 chr19:19568600-19576200 Enhancers Stomach Mucosa stomach
6 chr19:19568600-19576400 Enhancers Pancreas Pancrea
7 chr19:19569200-19576200 Weak transcription Hela-S3 cervix
8 chr19:19570400-19576000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
9 chr19:19570800-19576200 Enhancers Placenta Amnion Placenta Amnion
10 chr19:19571800-19576200 Enhancers Fetal Kidney kidney
11 chr19:19572600-19576000 Enhancers Ovary ovary
12 chr19:19573000-19576400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
13 chr19:19573400-19576000 Enhancers Brain Hippocampus Middle brain
14 chr19:19573600-19576000 Enhancers Primary T helper naive cells fromperipheralblood blood
15 chr19:19574200-19576200 Weak transcription Aorta Aorta
16 chr19:19574400-19576000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
17 chr19:19574600-19576200 Genic enhancers Primary T helper cells PMA-I stimulated --
18 chr19:19574800-19576200 Strong transcription Thymus Thymus
19 chr19:19574800-19576800 Strong transcription K562 blood
20 chr19:19575000-19576000 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr19:19575000-19576200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr19:19575000-19576200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr19:19575000-19577400 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chr19:19575000-19577400 Genic enhancers Fetal Muscle Trunk muscle
25 chr19:19575000-19577400 Genic enhancers Fetal Muscle Leg muscle
26 chr19:19575000-19577400 Genic enhancers HSMM muscle
27 chr19:19575000-19578200 Weak transcription Fetal Brain Male brain
28 chr19:19575000-19578600 Weak transcription Small Intestine intestine
29 chr19:19575200-19576200 Strong transcription Primary B cells from cord blood blood
30 chr19:19575200-19576200 Enhancers Fetal Heart heart
31 chr19:19575200-19577400 Genic enhancers Primary T cells fromperipheralblood blood
32 chr19:19575200-19577600 Strong transcription Primary B cells from peripheral blood blood
33 chr19:19575200-19577800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
34 chr19:19575200-19578000 Strong transcription HepG2 liver
35 chr19:19575400-19576000 Genic enhancers iPS-15b Cell Line embryonic stem cell
36 chr19:19575400-19576000 Enhancers Muscle Satellite Cultured Cells --
37 chr19:19575400-19576000 Weak transcription Fetal Brain Female brain
38 chr19:19575400-19576000 Enhancers Skeletal Muscle Female skeletal muscle
39 chr19:19575400-19576000 Weak transcription Osteobl bone
40 chr19:19575400-19576200 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr19:19575400-19576400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
42 chr19:19575400-19577000 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr19:19575400-19577200 Weak transcription Psoas Muscle Psoas
44 chr19:19575400-19577400 Strong transcription Primary T cells from cord blood blood
45 chr19:19575400-19577600 Strong transcription Primary T regulatory cells fromperipheralblood blood
46 chr19:19575400-19578200 Strong transcription Primary T helper cells fromperipheralblood blood
47 chr19:19575400-19578800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr19:19575600-19576000 Genic enhancers HUES6 Cell Line embryonic stem cell
49 chr19:19575600-19576000 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
50 chr19:19575600-19576000 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015