Variant report

Variant rs2965188
Chromosome Location chr19:19522557-19522558
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19518200-19522800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
2 chr19:19518400-19522600 Enhancers Primary T cells from cord blood blood
3 chr19:19518400-19522600 Enhancers Primary T killer memory cells from peripheral blood blood
4 chr19:19518400-19522800 Enhancers Primary T helper naive cells from peripheral blood blood
5 chr19:19518400-19525200 Enhancers Primary T killer naive cells fromperipheralblood blood
6 chr19:19518600-19522600 Enhancers Adipose Nuclei Adipose
7 chr19:19518600-19522800 Enhancers Primary T helper 17 cells PMA-I stimulated --
8 chr19:19518600-19522800 Enhancers Skeletal Muscle Female skeletal muscle
9 chr19:19518600-19527000 Weak transcription Brain Angular Gyrus brain
10 chr19:19518600-19529400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr19:19518600-19549800 Weak transcription Fetal Brain Female brain
12 chr19:19518800-19522600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr19:19518800-19525000 Weak transcription HUVEC blood vessel
14 chr19:19518800-19528200 Weak transcription Brain Germinal Matrix brain
15 chr19:19519000-19522600 Genic enhancers K562 blood
16 chr19:19519200-19522600 Enhancers Duodenum Mucosa Duodenum
17 chr19:19519200-19522800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
18 chr19:19519200-19522800 Enhancers Skeletal Muscle Male skeletal muscle
19 chr19:19519200-19523200 Enhancers Primary Natural Killer cells fromperipheralblood blood
20 chr19:19519400-19522800 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr19:19519600-19522600 Enhancers Left Ventricle heart
22 chr19:19519600-19522800 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
23 chr19:19519600-19522800 Enhancers Psoas Muscle Psoas
24 chr19:19519600-19522800 Enhancers Small Intestine intestine
25 chr19:19520000-19522600 Enhancers Esophagus oesophagus
26 chr19:19520000-19522600 Enhancers Right Atrium heart
27 chr19:19520000-19522800 Enhancers Fetal Heart heart
28 chr19:19520000-19522800 Enhancers Ovary ovary
29 chr19:19520200-19522800 Enhancers Right Ventricle heart
30 chr19:19520400-19522600 Genic enhancers Fetal Muscle Trunk muscle
31 chr19:19520400-19525000 Weak transcription Primary monocytes fromperipheralblood blood
32 chr19:19520600-19529200 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr19:19520800-19522800 Enhancers Fetal Adrenal Gland Adrenal Gland
34 chr19:19520800-19528000 Weak transcription Brain Substantia Nigra brain
35 chr19:19520800-19528800 Weak transcription Primary B cells from cord blood blood
36 chr19:19520800-19546800 Weak transcription Hela-S3 cervix
37 chr19:19521000-19522600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr19:19521000-19525600 Weak transcription A549 lung
39 chr19:19521000-19528200 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr19:19521000-19529000 Weak transcription H9 Cell Line embryonic stem cell
41 chr19:19521000-19545400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr19:19521200-19522800 Genic enhancers Primary B cells from peripheral blood blood
43 chr19:19521200-19522800 Genic enhancers Fetal Muscle Leg muscle
44 chr19:19521200-19527200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr19:19521200-19528000 Weak transcription Thymus Thymus
46 chr19:19521400-19522600 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr19:19521400-19522600 Enhancers Brain Hippocampus Middle brain
48 chr19:19521400-19522600 Strong transcription Fetal Stomach stomach
49 chr19:19521400-19522600 Genic enhancers Gastric stomach
50 chr19:19521400-19528800 Weak transcription Primary hematopoietic stem cells blood

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