The 2.0 version of rSNPBase

Variant report

Variant rs10410664
Chromosome Location chr19:19556651-19556652
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19522200-19563400 Weak transcription Placenta Amnion Placenta Amnion
2 chr19:19538400-19556800 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr19:19538400-19556800 Weak transcription HUES64 Cell Line embryonic stem cell
4 chr19:19540200-19562600 Weak transcription Fetal Intestine Large intestine
5 chr19:19544400-19563400 Weak transcription Fetal Kidney kidney
6 chr19:19545400-19562200 Weak transcription Brain Angular Gyrus brain
7 chr19:19545600-19568600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr19:19545800-19558200 Weak transcription Fetal Lung lung
9 chr19:19545800-19558400 Weak transcription HSMMtube muscle
10 chr19:19545800-19563400 Weak transcription Rectal Smooth Muscle rectum
11 chr19:19545800-19568600 Weak transcription Brain Substantia Nigra brain
12 chr19:19545800-19570600 Weak transcription Brain Cingulate Gyrus brain
13 chr19:19546000-19558200 Weak transcription Stomach Smooth Muscle stomach
14 chr19:19546000-19558600 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr19:19546000-19566600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr19:19546200-19569000 Weak transcription Colon Smooth Muscle Colon
17 chr19:19547800-19556800 Weak transcription Liver Liver
18 chr19:19547800-19558000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr19:19549800-19558000 Weak transcription Fetal Heart heart
20 chr19:19550000-19557600 Weak transcription Esophagus oesophagus
21 chr19:19550000-19562200 Weak transcription Brain Hippocampus Middle brain
22 chr19:19550400-19557400 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr19:19550400-19562400 Weak transcription A549 lung
24 chr19:19551000-19571200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr19:19551600-19558200 Weak transcription HSMM muscle
26 chr19:19553000-19563000 Enhancers Primary T cells fromperipheralblood blood
27 chr19:19553400-19562200 Enhancers Primary T helper naive cells from peripheral blood blood
28 chr19:19553400-19564400 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr19:19553400-19564800 Enhancers Primary T helper cells fromperipheralblood blood
30 chr19:19553600-19558600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr19:19553800-19556800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr19:19553800-19560200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
33 chr19:19554000-19558800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr19:19554000-19559200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
35 chr19:19554000-19560000 Genic enhancers Primary hematopoietic stem cells short term culture blood
36 chr19:19554000-19564000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
37 chr19:19554200-19559000 Enhancers Primary B cells from peripheral blood blood
38 chr19:19554200-19564600 Enhancers Primary T helper naive cells fromperipheralblood blood
39 chr19:19554400-19558800 Enhancers Primary monocytes fromperipheralblood blood
40 chr19:19554600-19557600 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr19:19554600-19557600 Enhancers HUVEC blood vessel
42 chr19:19554600-19559800 Enhancers Primary T regulatory cells fromperipheralblood blood
43 chr19:19554800-19556800 Enhancers Rectal Mucosa Donor 29 rectum
44 chr19:19554800-19560000 Enhancers Primary T helper 17 cells PMA-I stimulated --
45 chr19:19555000-19556800 Enhancers Lung lung
46 chr19:19555000-19559000 Enhancers Sigmoid Colon Sigmoid Colon
47 chr19:19555000-19559000 Enhancers Stomach Mucosa stomach
48 chr19:19555000-19559000 Enhancers NHDF-Ad bronchial
49 chr19:19555000-19559200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
50 chr19:19555000-19559400 Enhancers H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015