Variant report
| Variant | rs2350207 |
|---|---|
| Chromosome Location | chr11:26425085-26425086 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:20)
| rs_ID | r2[population] |
|---|---|
| rs10501050 | 0.92[CHB][hapmap] |
| rs10834976 | 0.92[CHB][hapmap] |
| rs11029548 | 0.92[CHB][hapmap] |
| rs11029549 | 0.92[CHB][hapmap] |
| rs11029551 | 0.92[CHB][hapmap] |
| rs11029553 | 1.00[CEU][hapmap];0.92[CHB][hapmap] |
| rs11029554 | 1.00[CEU][hapmap];0.92[CHB][hapmap] |
| rs11029559 | 0.88[ASN][1000 genomes] |
| rs11029561 | 0.85[ASN][1000 genomes] |
| rs12276198 | 1.00[CEU][hapmap];0.92[CHB][hapmap];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| rs12279935 | 0.92[CHB][hapmap] |
| rs12280286 | 0.83[CHB][hapmap] |
| rs12289490 | 0.92[CHB][hapmap] |
| rs12577529 | 0.90[ASN][1000 genomes] |
| rs1381175 | 0.92[CHB][hapmap];0.93[ASN][1000 genomes] |
| rs1461360 | 0.92[CHB][hapmap] |
| rs1461361 | 0.92[CHB][hapmap];0.93[ASN][1000 genomes] |
| rs1461362 | 0.92[CHB][hapmap];0.93[ASN][1000 genomes] |
| rs16915643 | 0.92[CHB][hapmap] |
| rs4394800 | 0.83[CHB][hapmap];0.90[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv2422406 | chr11:26329870-26473641 | Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
