The 2.0 version of rSNPBase

Variant report

Variant rs2362587
Chromosome Location chr1:246021941-246021942
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:245991000-246045000 Weak transcription Spleen Spleen
2 chr1:245997600-246023800 Weak transcription Ovary ovary
3 chr1:245999400-246024200 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr1:245999800-246038400 Weak transcription Aorta Aorta
5 chr1:246001200-246023400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:246001800-246056800 Weak transcription Primary hematopoietic stem cells blood
7 chr1:246006800-246041200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr1:246009600-246038200 Weak transcription Duodenum Mucosa Duodenum
9 chr1:246010200-246028200 Weak transcription Thymus Thymus
10 chr1:246012000-246024800 Weak transcription Esophagus oesophagus
11 chr1:246012800-246049600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:246013200-246023200 Weak transcription Stomach Smooth Muscle stomach
13 chr1:246014000-246022000 Strong transcription Primary T cells from cord blood blood
14 chr1:246014200-246026400 Weak transcription Brain Anterior Caudate brain
15 chr1:246014600-246022800 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr1:246014800-246023200 Strong transcription K562 blood
17 chr1:246015200-246028000 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr1:246015400-246038200 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr1:246015800-246022600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:246015800-246022800 Weak transcription Left Ventricle heart
21 chr1:246016000-246024800 Weak transcription Primary T cells fromperipheralblood blood
22 chr1:246017800-246036400 Weak transcription Right Ventricle heart
23 chr1:246018000-246026000 Weak transcription Primary B cells from cord blood blood
24 chr1:246018200-246022000 Weak transcription Fetal Heart heart
25 chr1:246018200-246026800 Weak transcription Primary B cells from peripheral blood blood
26 chr1:246018400-246026000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:246019000-246025200 Enhancers NH-A brain
28 chr1:246019200-246025200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
29 chr1:246019200-246067400 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr1:246019400-246022400 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr1:246019400-246022800 Weak transcription Brain Angular Gyrus brain
32 chr1:246019400-246024600 Strong transcription Primary hematopoietic stem cells short term culture blood
33 chr1:246019600-246022200 Weak transcription Small Intestine intestine
34 chr1:246019600-246022400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr1:246020200-246022600 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr1:246020200-246022800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr1:246020200-246022800 Weak transcription Fetal Lung lung
38 chr1:246020200-246028800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
39 chr1:246020200-246036000 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr1:246020400-246023800 Weak transcription Fetal Brain Female brain
41 chr1:246020600-246022600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr1:246020600-246022600 Weak transcription Placenta Amnion Placenta Amnion
43 chr1:246020600-246022600 Weak transcription HSMM muscle
44 chr1:246020600-246022800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr1:246020600-246023400 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr1:246020600-246024400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr1:246020800-246022000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr1:246020800-246022000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr1:246020800-246022000 Strong transcription Fetal Intestine Small intestine
50 chr1:246020800-246022400 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015