Variant report

Variant rs9729885
Chromosome Location chr1:246015597-246015598
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:245974400-246020800 Weak transcription Fetal Intestine Small intestine
2 chr1:245986600-246021600 Weak transcription Fetal Stomach stomach
3 chr1:245990800-246016600 Weak transcription Lung lung
4 chr1:245990800-246019000 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr1:245991000-246018000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr1:245991000-246045000 Weak transcription Spleen Spleen
7 chr1:245991200-246019200 Weak transcription Pancreas Pancrea
8 chr1:245994400-246018000 Weak transcription HepG2 liver
9 chr1:245996800-246021200 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr1:245997600-246023800 Weak transcription Ovary ovary
11 chr1:245998000-246020400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr1:245998200-246020800 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr1:245998400-246017600 Weak transcription Primary B cells from cord blood blood
14 chr1:245999400-246019200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr1:245999400-246024200 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr1:245999800-246038400 Weak transcription Aorta Aorta
17 chr1:246000200-246019200 Weak transcription Gastric stomach
18 chr1:246000200-246019200 Weak transcription NHLF lung
19 chr1:246000800-246019200 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr1:246001200-246023400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:246001800-246016200 Weak transcription Osteobl bone
22 chr1:246001800-246016600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr1:246001800-246019200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:246001800-246019200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:246001800-246056800 Weak transcription Primary hematopoietic stem cells blood
26 chr1:246006600-246021800 Weak transcription Fetal Muscle Leg muscle
27 chr1:246006800-246041200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr1:246007000-246019200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr1:246007600-246019600 Weak transcription Brain Hippocampus Middle brain
30 chr1:246007800-246019400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:246009600-246038200 Weak transcription Duodenum Mucosa Duodenum
32 chr1:246010200-246019200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:246010200-246028200 Weak transcription Thymus Thymus
34 chr1:246011000-246017800 Weak transcription Primary B cells from peripheral blood blood
35 chr1:246012000-246016600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr1:246012000-246024800 Weak transcription Esophagus oesophagus
37 chr1:246012600-246021800 Weak transcription Fetal Muscle Trunk muscle
38 chr1:246012800-246021200 Weak transcription Dnd41 blood
39 chr1:246012800-246049600 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr1:246013200-246023200 Weak transcription Stomach Smooth Muscle stomach
41 chr1:246013800-246020400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr1:246014000-246022000 Strong transcription Primary T cells from cord blood blood
43 chr1:246014200-246026400 Weak transcription Brain Anterior Caudate brain
44 chr1:246014400-246018000 Weak transcription HSMMtube muscle
45 chr1:246014400-246019800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr1:246014600-246022800 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr1:246014800-246023200 Strong transcription K562 blood
48 chr1:246015000-246015600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr1:246015000-246015800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr1:246015000-246015800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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