The 2.0 version of rSNPBase

Variant report

Variant rs2362592
Chromosome Location chr1:246020851-246020852
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:245986600-246021600 Weak transcription Fetal Stomach stomach
2 chr1:245991000-246045000 Weak transcription Spleen Spleen
3 chr1:245996800-246021200 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr1:245997600-246023800 Weak transcription Ovary ovary
5 chr1:245999400-246024200 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr1:245999800-246038400 Weak transcription Aorta Aorta
7 chr1:246001200-246023400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:246001800-246056800 Weak transcription Primary hematopoietic stem cells blood
9 chr1:246006600-246021800 Weak transcription Fetal Muscle Leg muscle
10 chr1:246006800-246041200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr1:246009600-246038200 Weak transcription Duodenum Mucosa Duodenum
12 chr1:246010200-246028200 Weak transcription Thymus Thymus
13 chr1:246012000-246024800 Weak transcription Esophagus oesophagus
14 chr1:246012600-246021800 Weak transcription Fetal Muscle Trunk muscle
15 chr1:246012800-246021200 Weak transcription Dnd41 blood
16 chr1:246012800-246049600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:246013200-246023200 Weak transcription Stomach Smooth Muscle stomach
18 chr1:246014000-246022000 Strong transcription Primary T cells from cord blood blood
19 chr1:246014200-246026400 Weak transcription Brain Anterior Caudate brain
20 chr1:246014600-246022800 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr1:246014800-246023200 Strong transcription K562 blood
22 chr1:246015200-246028000 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr1:246015400-246038200 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr1:246015800-246022600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:246015800-246022800 Weak transcription Left Ventricle heart
26 chr1:246016000-246024800 Weak transcription Primary T cells fromperipheralblood blood
27 chr1:246017800-246036400 Weak transcription Right Ventricle heart
28 chr1:246018000-246026000 Weak transcription Primary B cells from cord blood blood
29 chr1:246018200-246022000 Weak transcription Fetal Heart heart
30 chr1:246018200-246026800 Weak transcription Primary B cells from peripheral blood blood
31 chr1:246018400-246021000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:246018400-246026000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:246019000-246025200 Enhancers NH-A brain
34 chr1:246019200-246021000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr1:246019200-246021000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr1:246019200-246021000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:246019200-246021000 Enhancers Pancreas Pancrea
38 chr1:246019200-246021000 Enhancers Osteobl bone
39 chr1:246019200-246025200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:246019200-246067400 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr1:246019400-246021200 Enhancers Stomach Mucosa stomach
42 chr1:246019400-246022400 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr1:246019400-246022800 Weak transcription Brain Angular Gyrus brain
44 chr1:246019400-246024600 Strong transcription Primary hematopoietic stem cells short term culture blood
45 chr1:246019600-246022200 Weak transcription Small Intestine intestine
46 chr1:246019600-246022400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr1:246019800-246021000 Enhancers Lung lung
48 chr1:246019800-246021000 Enhancers HSMMtube muscle
49 chr1:246020000-246021600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr1:246020200-246021000 Weak transcription Gastric stomach

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Last update: Aug 31, 2015