The 2.0 version of rSNPBase

Variant report

Variant rs4654137
Chromosome Location chr1:246017434-246017435
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:245974400-246020800 Weak transcription Fetal Intestine Small intestine
2 chr1:245986600-246021600 Weak transcription Fetal Stomach stomach
3 chr1:245990800-246019000 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr1:245991000-246018000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr1:245991000-246045000 Weak transcription Spleen Spleen
6 chr1:245991200-246019200 Weak transcription Pancreas Pancrea
7 chr1:245994400-246018000 Weak transcription HepG2 liver
8 chr1:245996800-246021200 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr1:245997600-246023800 Weak transcription Ovary ovary
10 chr1:245998000-246020400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr1:245998200-246020800 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr1:245998400-246017600 Weak transcription Primary B cells from cord blood blood
13 chr1:245999400-246019200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr1:245999400-246024200 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr1:245999800-246038400 Weak transcription Aorta Aorta
16 chr1:246000200-246019200 Weak transcription Gastric stomach
17 chr1:246000200-246019200 Weak transcription NHLF lung
18 chr1:246000800-246019200 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr1:246001200-246023400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr1:246001800-246019200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:246001800-246019200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr1:246001800-246056800 Weak transcription Primary hematopoietic stem cells blood
23 chr1:246006600-246021800 Weak transcription Fetal Muscle Leg muscle
24 chr1:246006800-246041200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr1:246007000-246019200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr1:246007600-246019600 Weak transcription Brain Hippocampus Middle brain
27 chr1:246007800-246019400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr1:246009600-246038200 Weak transcription Duodenum Mucosa Duodenum
29 chr1:246010200-246019200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:246010200-246028200 Weak transcription Thymus Thymus
31 chr1:246011000-246017800 Weak transcription Primary B cells from peripheral blood blood
32 chr1:246012000-246024800 Weak transcription Esophagus oesophagus
33 chr1:246012600-246021800 Weak transcription Fetal Muscle Trunk muscle
34 chr1:246012800-246021200 Weak transcription Dnd41 blood
35 chr1:246012800-246049600 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr1:246013200-246023200 Weak transcription Stomach Smooth Muscle stomach
37 chr1:246013800-246020400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr1:246014000-246022000 Strong transcription Primary T cells from cord blood blood
39 chr1:246014200-246026400 Weak transcription Brain Anterior Caudate brain
40 chr1:246014400-246018000 Weak transcription HSMMtube muscle
41 chr1:246014400-246019800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:246014600-246022800 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr1:246014800-246023200 Strong transcription K562 blood
44 chr1:246015000-246019000 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr1:246015200-246028000 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr1:246015400-246038200 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr1:246015600-246020000 Weak transcription Placenta Placenta
48 chr1:246015800-246019200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr1:246015800-246019400 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr1:246015800-246022600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015