The 2.0 version of rSNPBase

Variant report

Variant rs236264
Chromosome Location chr1:94108811-94108812
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94088600-94118800 Weak transcription Gastric stomach
2 chr1:94091800-94117400 Weak transcription Fetal Lung lung
3 chr1:94094200-94120400 Weak transcription Psoas Muscle Psoas
4 chr1:94095600-94125400 Weak transcription Colon Smooth Muscle Colon
5 chr1:94097800-94111400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:94100000-94135800 Weak transcription Fetal Stomach stomach
7 chr1:94100400-94112000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr1:94101600-94109800 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr1:94101600-94128800 Weak transcription Right Ventricle heart
10 chr1:94101800-94110400 Weak transcription H9 Cell Line embryonic stem cell
11 chr1:94102000-94117200 Weak transcription Lung lung
12 chr1:94102000-94119800 Weak transcription HSMMtube muscle
13 chr1:94102000-94125400 Weak transcription Fetal Kidney kidney
14 chr1:94102000-94125600 Weak transcription Fetal Muscle Trunk muscle
15 chr1:94102600-94114200 Weak transcription Brain Substantia Nigra brain
16 chr1:94102600-94119200 Weak transcription Fetal Intestine Small intestine
17 chr1:94102800-94119000 Weak transcription Brain Angular Gyrus brain
18 chr1:94103000-94121800 Weak transcription Duodenum Mucosa Duodenum
19 chr1:94103800-94135800 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr1:94104800-94117600 Weak transcription HepG2 liver
21 chr1:94105000-94109200 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr1:94105000-94109200 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr1:94105000-94109600 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr1:94105000-94110000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr1:94105000-94110200 Weak transcription H1 Cell Line embryonic stem cell
26 chr1:94105000-94110400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr1:94105000-94110600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:94105000-94113800 Weak transcription Brain Anterior Caudate brain
29 chr1:94105000-94118200 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr1:94105800-94117200 Weak transcription Brain Inferior Temporal Lobe brain
31 chr1:94106400-94109200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:94106400-94126000 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr1:94106600-94114400 Strong transcription HMEC breast
34 chr1:94106800-94115200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr1:94106800-94118800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr1:94107000-94114400 Weak transcription Left Ventricle heart
37 chr1:94107200-94125600 Weak transcription Aorta Aorta
38 chr1:94107400-94110800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr1:94107600-94114400 Weak transcription Brain Cingulate Gyrus brain
40 chr1:94107600-94119200 Weak transcription Stomach Smooth Muscle stomach
41 chr1:94107800-94110400 Weak transcription NH-A brain
42 chr1:94107800-94120000 Weak transcription Primary B cells from cord blood blood
43 chr1:94108200-94109200 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr1:94108200-94109400 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr1:94108200-94110400 Weak transcription A549 lung
46 chr1:94108200-94112400 Weak transcription Hela-S3 cervix
47 chr1:94108200-94114400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr1:94108200-94116600 Weak transcription Fetal Muscle Leg muscle
49 chr1:94108200-94118800 Weak transcription NHDF-Ad bronchial
50 chr1:94108200-94119400 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015