The 2.0 version of rSNPBase

Variant report

Variant rs236282
Chromosome Location chr1:94126433-94126434
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94100000-94135800 Weak transcription Fetal Stomach stomach
2 chr1:94101600-94128800 Weak transcription Right Ventricle heart
3 chr1:94103800-94135800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:94108600-94130400 Weak transcription Esophagus oesophagus
5 chr1:94110800-94127400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr1:94110800-94128800 Weak transcription Primary B cells from peripheral blood blood
7 chr1:94110800-94130200 Weak transcription H9 Cell Line embryonic stem cell
8 chr1:94111200-94127600 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr1:94111600-94126800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr1:94111800-94127400 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr1:94112400-94127400 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr1:94115000-94128800 Weak transcription Left Ventricle heart
13 chr1:94115000-94132000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr1:94117400-94127400 Genic enhancers Muscle Satellite Cultured Cells --
15 chr1:94117400-94128800 Weak transcription Spleen Spleen
16 chr1:94117600-94127600 Weak transcription H1 Cell Line embryonic stem cell
17 chr1:94117600-94128200 Weak transcription Brain Inferior Temporal Lobe brain
18 chr1:94119600-94128800 Weak transcription Lung lung
19 chr1:94119800-94127200 Weak transcription Placenta Amnion Placenta Amnion
20 chr1:94119800-94128800 Weak transcription Gastric stomach
21 chr1:94120000-94128800 Weak transcription Right Atrium heart
22 chr1:94120400-94127400 Weak transcription Brain Hippocampus Middle brain
23 chr1:94120400-94127400 Weak transcription Stomach Smooth Muscle stomach
24 chr1:94120600-94128800 Weak transcription Psoas Muscle Psoas
25 chr1:94120800-94126800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr1:94120800-94127000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr1:94121600-94127400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr1:94122600-94127600 Weak transcription Duodenum Mucosa Duodenum
29 chr1:94122800-94128000 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr1:94123000-94127200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:94123200-94128800 Weak transcription Pancreas Pancrea
32 chr1:94123200-94135800 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr1:94123400-94127400 Weak transcription HUVEC blood vessel
34 chr1:94123800-94127600 Weak transcription GM12878-XiMat blood
35 chr1:94124200-94127000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr1:94124600-94127400 Strong transcription HMEC breast
37 chr1:94124800-94127400 Strong transcription NHEK skin
38 chr1:94124800-94127600 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr1:94125000-94126600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:94125000-94127600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:94125200-94126600 Enhancers HepG2 liver
42 chr1:94125400-94127600 Enhancers Adipose Nuclei Adipose
43 chr1:94125400-94128800 Enhancers Fetal Muscle Leg muscle
44 chr1:94125600-94127200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:94125600-94127400 Enhancers Fetal Muscle Trunk muscle
46 chr1:94125600-94127400 Enhancers NHDF-Ad bronchial
47 chr1:94125800-94127400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr1:94126000-94126600 Enhancers Duodenum Smooth Muscle Duodenum
49 chr1:94126000-94126800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr1:94126000-94127000 Weak transcription Ovary ovary

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Last update: Aug 31, 2015