Variant report

Variant rs2400313
Chromosome Location chr5:100226669-100226670
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:100200200-100234400 Weak transcription Fetal Brain Male brain
2 chr5:100208000-100235800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr5:100219000-100233400 Weak transcription Brain Germinal Matrix brain
4 chr5:100222200-100229600 Weak transcription Primary T cells fromperipheralblood blood
5 chr5:100222400-100228000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr5:100223200-100229600 Weak transcription Fetal Thymus thymus
7 chr5:100223600-100228200 Enhancers Primary T killer naive cells fromperipheralblood blood
8 chr5:100224200-100227200 Enhancers Primary T killer memory cells from peripheral blood blood
9 chr5:100224600-100227400 Enhancers Primary hematopoietic stem cells short term culture blood
10 chr5:100224600-100227600 Flanking Active TSS Dnd41 blood
11 chr5:100224800-100226800 Active TSS Primary Natural Killer cells fromperipheralblood blood
12 chr5:100224800-100227000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr5:100224800-100227400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr5:100225000-100226800 Active TSS Adipose Nuclei Adipose
15 chr5:100225000-100226800 Active TSS Duodenum Mucosa Duodenum
16 chr5:100225000-100227000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
17 chr5:100225000-100227000 Active TSS Rectal Mucosa Donor 29 rectum
18 chr5:100225000-100227000 Active TSS Right Atrium heart
19 chr5:100225000-100227400 Enhancers Primary neutrophils fromperipheralblood blood
20 chr5:100225000-100231600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr5:100225200-100233800 Weak transcription Thymus Thymus
22 chr5:100225400-100226800 Active TSS Fetal Lung lung
23 chr5:100225400-100226800 Active TSS A549 lung
24 chr5:100225400-100227000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr5:100225400-100227400 Enhancers Primary T helper cells fromperipheralblood blood
26 chr5:100225400-100227600 Enhancers Primary T helper naive cells fromperipheralblood blood
27 chr5:100226000-100226800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr5:100226000-100226800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr5:100226000-100227000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
30 chr5:100226000-100227200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
31 chr5:100226000-100227200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
32 chr5:100226200-100226800 Flanking Active TSS Primary B cells from cord blood blood
33 chr5:100226200-100227400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr5:100226200-100227400 Enhancers Primary T helper naive cells from peripheral blood blood
35 chr5:100226400-100226800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr5:100226400-100226800 Enhancers Hela-S3 cervix
37 chr5:100226400-100227000 Flanking Active TSS Osteobl bone
38 chr5:100226400-100228200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
39 chr5:100226400-100229000 Weak transcription HUVEC blood vessel
40 chr5:100226400-100229200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr5:100226400-100233800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr5:100226400-100235600 Weak transcription Placenta Placenta
43 chr5:100226600-100226800 Flanking Active TSS Muscle Satellite Cultured Cells --
44 chr5:100226600-100226800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
45 chr5:100226600-100227000 Flanking Active TSS Primary monocytes fromperipheralblood blood
46 chr5:100226600-100227000 Flanking Active TSS Primary T cells from cord blood blood
47 chr5:100226600-100227000 Enhancers Pancreatic Islets Pancreatic Islet
48 chr5:100226600-100227000 Flanking Active TSS GM12878-XiMat blood
49 chr5:100226600-100227200 Enhancers HSMM muscle
50 chr5:100226600-100227400 Enhancers Primary hematopoietic stem cells blood

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