Variant report

Variant rs2402588
Chromosome Location chr7:121436119-121436120
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:121426600-121436200 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr7:121433800-121442400 Enhancers HMEC breast
3 chr7:121434000-121440200 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr7:121434000-121440200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr7:121435000-121436400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
6 chr7:121435000-121436800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr7:121435000-121437600 Enhancers Cortex derived primary cultured neurospheres brain
8 chr7:121435000-121438400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr7:121435200-121436600 Enhancers Fetal Brain Female brain
10 chr7:121435200-121437600 Enhancers Brain Germinal Matrix brain
11 chr7:121435400-121436200 Enhancers Brain Substantia Nigra brain
12 chr7:121435400-121438800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr7:121435400-121440000 Enhancers H1 Cell Line embryonic stem cell
14 chr7:121435600-121439800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr7:121435800-121436200 Enhancers Brain Anterior Caudate brain
16 chr7:121435800-121436200 Weak transcription Brain Hippocampus Middle brain
17 chr7:121435800-121436800 Enhancers Fetal Brain Male brain
18 chr7:121435800-121437600 Enhancers iPS-18 Cell Line embryonic stem cell
19 chr7:121435800-121440000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr7:121435800-121440400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr7:121436000-121436200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr7:121436000-121436400 Flanking Active TSS NHEK skin
23 chr7:121436000-121436600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr7:121436000-121436800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr7:121436000-121437000 Enhancers iPS-20b Cell Line embryonic stem cell
26 chr7:121436000-121437400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr7:121436000-121437400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr7:121436000-121440200 Enhancers iPS-15b Cell Line embryonic stem cell
29 chr7:121436000-121440800 Enhancers HUES64 Cell Line embryonic stem cell
30 chr7:121436000-121441000 Enhancers ES-UCSF4 Cell Line embryonic stem cell

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