Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10215484	1.00[ASN][1000 genomes]
rs10226240	1.00[ASN][1000 genomes]
rs10234968	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10242603	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10244523	1.00[ASN][1000 genomes]
rs10247917	1.00[ASN][1000 genomes]
rs10260118	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10262109	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10262440	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10263697	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10263742	0.89[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10263874	0.89[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10268905	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10275166	1.00[ASN][1000 genomes]
rs10281297	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11971648	1.00[ASN][1000 genomes]
rs11973813	1.00[ASN][1000 genomes]
rs11980387	1.00[ASN][1000 genomes]
rs17143855	1.00[ASN][1000 genomes]
rs2402588	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28886379	1.00[ASN][1000 genomes]
rs2896309	1.00[ASN][1000 genomes]
rs57075189	1.00[ASN][1000 genomes]
rs6949130	1.00[ASN][1000 genomes]
rs7793636	1.00[ASN][1000 genomes]
rs7797647	1.00[ASN][1000 genomes]
rs994803	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429808	chr7:121384049-121600049	Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:121440600-121450400	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr7:121443200-121458800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr7:121444000-121447800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr7:121444200-121447600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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