Variant report

Variant rs2412646
Chromosome Location chr4:56318772-56318773
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:56265600-56319800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr4:56268800-56326000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr4:56274600-56332200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr4:56276000-56320000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr4:56279000-56321800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr4:56290800-56340400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr4:56290800-56340600 Weak transcription Thymus Thymus
8 chr4:56293000-56324800 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr4:56293000-56354800 Weak transcription Aorta Aorta
10 chr4:56294000-56341200 Weak transcription Small Intestine intestine
11 chr4:56301600-56334800 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr4:56301800-56332200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr4:56301800-56339200 Weak transcription Fetal Brain Male brain
14 chr4:56302400-56375600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr4:56303000-56340200 Weak transcription Colon Smooth Muscle Colon
16 chr4:56304000-56331800 Weak transcription Esophagus oesophagus
17 chr4:56304600-56365600 Weak transcription Spleen Spleen
18 chr4:56304800-56331800 Weak transcription Gastric stomach
19 chr4:56304800-56340000 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr4:56304800-56375800 Weak transcription Pancreas Pancrea
21 chr4:56306000-56361200 Weak transcription Stomach Mucosa stomach
22 chr4:56307600-56340400 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr4:56308800-56340400 Weak transcription Placenta Amnion Placenta Amnion
24 chr4:56312000-56319600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr4:56312200-56322200 Strong transcription iPS-20b Cell Line embryonic stem cell
26 chr4:56312600-56325600 Strong transcription Liver Liver
27 chr4:56313200-56325400 Strong transcription HUES64 Cell Line embryonic stem cell
28 chr4:56313400-56322000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr4:56313400-56322200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr4:56313400-56325400 Strong transcription HUES48 Cell Line embryonic stem cell
31 chr4:56313600-56318800 Strong transcription Rectal Mucosa Donor 31 rectum
32 chr4:56313600-56318800 Strong transcription K562 blood
33 chr4:56313600-56319600 Strong transcription HUES6 Cell Line embryonic stem cell
34 chr4:56313600-56328400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr4:56313800-56318800 Strong transcription H1 Cell Line embryonic stem cell
36 chr4:56313800-56321800 Strong transcription iPS-18 Cell Line embryonic stem cell
37 chr4:56313800-56324800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr4:56313800-56325200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr4:56314000-56319000 Strong transcription Placenta Placenta
40 chr4:56314000-56319200 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr4:56314000-56321600 Strong transcription Primary monocytes fromperipheralblood blood
42 chr4:56314200-56318800 Strong transcription Dnd41 blood
43 chr4:56314200-56319000 Strong transcription Breast Myoepithelial Primary Cells Breast
44 chr4:56314200-56319600 Strong transcription Adipose Nuclei Adipose
45 chr4:56314200-56319600 Strong transcription Fetal Brain Female brain
46 chr4:56314200-56319600 Strong transcription HSMM muscle
47 chr4:56314200-56320000 Strong transcription Primary B cells from peripheral blood blood
48 chr4:56314200-56325800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
49 chr4:56314400-56318800 Strong transcription Primary T cells from cord blood blood
50 chr4:56314400-56318800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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