Variant report

Variant rs6811520
Chromosome Location chr4:56315178-56315179
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:56265600-56319800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr4:56268800-56326000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr4:56274600-56332200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr4:56276000-56320000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr4:56279000-56321800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr4:56288400-56318400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr4:56290800-56340400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr4:56290800-56340600 Weak transcription Thymus Thymus
9 chr4:56293000-56324800 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr4:56293000-56354800 Weak transcription Aorta Aorta
11 chr4:56294000-56341200 Weak transcription Small Intestine intestine
12 chr4:56301600-56334800 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr4:56301800-56316200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr4:56301800-56316200 Weak transcription Rectal Smooth Muscle rectum
15 chr4:56301800-56318000 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr4:56301800-56318000 Weak transcription Right Ventricle heart
17 chr4:56301800-56332200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr4:56301800-56339200 Weak transcription Fetal Brain Male brain
19 chr4:56302200-56315600 Weak transcription Fetal Stomach stomach
20 chr4:56302400-56375600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr4:56303000-56340200 Weak transcription Colon Smooth Muscle Colon
22 chr4:56304000-56331800 Weak transcription Esophagus oesophagus
23 chr4:56304600-56316200 Weak transcription Lung lung
24 chr4:56304600-56365600 Weak transcription Spleen Spleen
25 chr4:56304800-56331800 Weak transcription Gastric stomach
26 chr4:56304800-56340000 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr4:56304800-56375800 Weak transcription Pancreas Pancrea
28 chr4:56305000-56318200 Weak transcription HSMMtube muscle
29 chr4:56305200-56317800 Weak transcription Brain Germinal Matrix brain
30 chr4:56306000-56318200 Weak transcription Brain Substantia Nigra brain
31 chr4:56306000-56361200 Weak transcription Stomach Mucosa stomach
32 chr4:56307400-56315400 Weak transcription Primary hematopoietic stem cells blood
33 chr4:56307600-56340400 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr4:56308800-56340400 Weak transcription Placenta Amnion Placenta Amnion
35 chr4:56309400-56316200 Weak transcription Fetal Lung lung
36 chr4:56309400-56316200 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr4:56311400-56317000 Strong transcription Fetal Intestine Small intestine
38 chr4:56311600-56315600 Weak transcription Ovary ovary
39 chr4:56311600-56317400 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr4:56311800-56316200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr4:56312000-56319600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr4:56312200-56322200 Strong transcription iPS-20b Cell Line embryonic stem cell
43 chr4:56312400-56316200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr4:56312600-56316200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr4:56312600-56316200 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr4:56312600-56325600 Strong transcription Liver Liver
47 chr4:56312800-56318000 Weak transcription NHEK skin
48 chr4:56313200-56325400 Strong transcription HUES64 Cell Line embryonic stem cell
49 chr4:56313400-56322000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr4:56313400-56322200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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