Variant report

No.	Distal block	Cell Line	Cell type
1	chr14:69458865..69460380-chr14:69470355..69472352,2	MCF-7	breast:
2	chr14:69458852..69460373-chr14:69463166..69465084,2	K562	blood:
3	chr14:69454329..69457831-chr14:69459163..69461306,3	MCF-7	breast:
4	chr14:69452392..69454117-chr14:69457524..69459973,2	K562	blood:
5	chr14:69459219..69461706-chr14:69466342..69467998,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10129558	0.82[ASN][1000 genomes]
rs10144056	0.94[ASN][1000 genomes]
rs10151419	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11623192	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1275194	0.95[CEU][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1983700	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2012752	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2284906	0.94[ASN][1000 genomes]
rs242091	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs242097	0.95[CEU][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs242101	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs242102	0.95[CEU][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs242106	0.82[CHB][hapmap]
rs242108	0.82[CHB][hapmap]
rs242109	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs28396849	0.97[ASN][1000 genomes]
rs28698682	0.97[ASN][1000 genomes]
rs436106	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4899275	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4902683	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs58860097	0.94[ASN][1000 genomes]
rs7140693	1.00[JPT][hapmap]
rs927064	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832823	chr14:69388853-69567638	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69447000-69471400	Weak transcription	Esophagus	oesophagus
2	chr14:69453400-69460600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
3	chr14:69454800-69461200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
4	chr14:69455600-69465200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr14:69456000-69464400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr14:69456000-69471200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr14:69459000-69459400	Weak transcription	Spleen	Spleen

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