The 2.0 version of rSNPBase

Variant report

Variant rs2460407
Chromosome Location chr2:7177053-7177054
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:7151200-7185200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:7152600-7192400 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr2:7154000-7183200 Strong transcription Primary T cells from cord blood blood
4 chr2:7154000-7190200 Strong transcription Dnd41 blood
5 chr2:7154600-7184200 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr2:7155200-7182000 Strong transcription Primary T helper naive cells fromperipheralblood blood
7 chr2:7155600-7178800 Strong transcription Primary T helper cells PMA-I stimulated --
8 chr2:7157000-7177600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
9 chr2:7157000-7179200 Weak transcription Aorta Aorta
10 chr2:7157200-7185200 Strong transcription Primary hematopoietic stem cells short term culture blood
11 chr2:7158200-7188800 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr2:7158400-7186800 Weak transcription Placenta Amnion Placenta Amnion
13 chr2:7159000-7181000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr2:7159400-7186800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr2:7159600-7180600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr2:7163200-7177400 Weak transcription Fetal Brain Male brain
17 chr2:7164000-7177600 Weak transcription NHDF-Ad bronchial
18 chr2:7164000-7178000 Weak transcription K562 blood
19 chr2:7164600-7182200 Weak transcription Small Intestine intestine
20 chr2:7164800-7189000 Weak transcription H1 Cell Line embryonic stem cell
21 chr2:7165400-7179200 Weak transcription Colonic Mucosa Colon
22 chr2:7166800-7177800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr2:7167000-7177800 Strong transcription Breast Myoepithelial Primary Cells Breast
24 chr2:7167400-7200400 Weak transcription Rectal Smooth Muscle rectum
25 chr2:7167800-7182800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr2:7168000-7180000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr2:7168000-7185400 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr2:7169600-7184200 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr2:7169800-7177200 Weak transcription Right Atrium heart
30 chr2:7170400-7177200 Strong transcription Brain Hippocampus Middle brain
31 chr2:7170800-7187600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr2:7171600-7179600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr2:7171800-7177800 Strong transcription Primary T helper cells fromperipheralblood blood
34 chr2:7172000-7191200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr2:7172200-7177600 Weak transcription Fetal Heart heart
36 chr2:7172200-7178800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr2:7172200-7179600 Weak transcription Placenta Placenta
38 chr2:7172200-7184200 Weak transcription Gastric stomach
39 chr2:7172200-7186400 Weak transcription Primary monocytes fromperipheralblood blood
40 chr2:7172200-7197200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr2:7172400-7177800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr2:7172400-7178000 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr2:7172400-7184400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr2:7172600-7182200 Strong transcription Primary T cells fromperipheralblood blood
45 chr2:7172800-7177600 Strong transcription Primary neutrophils fromperipheralblood blood
46 chr2:7173000-7177200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr2:7173000-7177800 Strong transcription Primary hematopoietic stem cells blood
48 chr2:7173200-7180600 Strong transcription Fetal Muscle Leg muscle
49 chr2:7173200-7183000 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr2:7173400-7177400 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015