The 2.0 version of rSNPBase

Variant report

Variant rs309305
Chromosome Location chr2:7179477-7179478
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:7151200-7185200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:7152600-7192400 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr2:7154000-7183200 Strong transcription Primary T cells from cord blood blood
4 chr2:7154000-7190200 Strong transcription Dnd41 blood
5 chr2:7154600-7184200 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr2:7155200-7182000 Strong transcription Primary T helper naive cells fromperipheralblood blood
7 chr2:7157200-7185200 Strong transcription Primary hematopoietic stem cells short term culture blood
8 chr2:7158200-7188800 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr2:7158400-7186800 Weak transcription Placenta Amnion Placenta Amnion
10 chr2:7159000-7181000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr2:7159400-7186800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:7159600-7180600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr2:7164600-7182200 Weak transcription Small Intestine intestine
14 chr2:7164800-7189000 Weak transcription H1 Cell Line embryonic stem cell
15 chr2:7167400-7200400 Weak transcription Rectal Smooth Muscle rectum
16 chr2:7167800-7182800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr2:7168000-7180000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr2:7168000-7185400 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr2:7169600-7184200 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr2:7170800-7187600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr2:7171600-7179600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr2:7172000-7191200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr2:7172200-7179600 Weak transcription Placenta Placenta
24 chr2:7172200-7184200 Weak transcription Gastric stomach
25 chr2:7172200-7186400 Weak transcription Primary monocytes fromperipheralblood blood
26 chr2:7172200-7197200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr2:7172400-7184400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr2:7172600-7182200 Strong transcription Primary T cells fromperipheralblood blood
29 chr2:7173200-7180600 Strong transcription Fetal Muscle Leg muscle
30 chr2:7173200-7183000 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr2:7173400-7179600 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr2:7173400-7180600 Weak transcription Stomach Smooth Muscle stomach
33 chr2:7173400-7183600 Weak transcription H9 Cell Line embryonic stem cell
34 chr2:7173600-7179600 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr2:7173600-7180000 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr2:7173600-7184200 Weak transcription Thymus Thymus
37 chr2:7173600-7189200 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr2:7173800-7188600 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr2:7174200-7179600 Weak transcription Esophagus oesophagus
40 chr2:7174200-7184600 Weak transcription Duodenum Mucosa Duodenum
41 chr2:7174600-7179600 Weak transcription Right Ventricle heart
42 chr2:7174800-7195200 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr2:7175000-7179800 Weak transcription Lung lung
44 chr2:7175400-7179800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr2:7175400-7187600 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr2:7175600-7183400 Strong transcription Fetal Adrenal Gland Adrenal Gland
47 chr2:7175800-7179600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr2:7175800-7182800 Strong transcription Spleen Spleen
49 chr2:7175800-7187400 Weak transcription Fetal Intestine Small intestine
50 chr2:7176200-7180000 Weak transcription HepG2 liver

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Last update: Aug 31, 2015