Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:104472870..104474526-chr9:104475820..104477413,2	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1323428	0.82[ASN][1000 genomes]
rs1337677	0.94[EUR][1000 genomes]
rs1337683	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1337710	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1415646	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1415651	0.88[EUR][1000 genomes]
rs1832334	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1977724	0.81[ASN][1000 genomes]
rs2065964	0.82[EUR][1000 genomes]
rs2065965	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2152866	0.89[ASN][1000 genomes]
rs2210991	0.90[ASN][1000 genomes]
rs2210993	0.82[ASN][1000 genomes]
rs2485524	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2485526	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2485529	0.83[AFR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2485532	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2485535	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2506351	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2506358	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2506360	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2506361	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2506363	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4742822	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7390803	0.82[EUR][1000 genomes]
rs7849059	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs945870	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046975	chr9:104167583-104659873	Weak transcription Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	nsv949579	chr9:104229820-104512923	Genic enhancers Enhancers Strong transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
3	nsv831672	chr9:104300755-104480849	Weak transcription Strong transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
4	nsv1046590	chr9:104450624-104848588	Enhancers Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:104468000-104474400	Weak transcription	Pancreas	Pancrea
2	chr9:104473800-104478000	Weak transcription	Pancreatic Islets	Pancreatic Islet

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