The 2.0 version of rSNPBase

Variant report

Variant rs2500437
Chromosome Location chr20:25317094-25317095
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25292000-25325200 Weak transcription Primary hematopoietic stem cells blood
2 chr20:25292000-25327400 Weak transcription Aorta Aorta
3 chr20:25292400-25325200 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr20:25292600-25351600 Weak transcription NHDF-Ad bronchial
5 chr20:25297800-25317800 Weak transcription Fetal Brain Female brain
6 chr20:25302200-25317200 Weak transcription Esophagus oesophagus
7 chr20:25302800-25324400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr20:25304000-25324800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr20:25304400-25317200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr20:25304400-25319000 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr20:25304400-25324200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr20:25304400-25327000 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr20:25304600-25317200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr20:25304800-25317800 Weak transcription Gastric stomach
15 chr20:25304800-25318000 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr20:25304800-25322800 Weak transcription Stomach Smooth Muscle stomach
17 chr20:25305000-25317200 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr20:25305000-25327000 Weak transcription Primary T cells from cord blood blood
19 chr20:25305000-25331800 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr20:25305400-25319000 Weak transcription Duodenum Mucosa Duodenum
21 chr20:25305400-25319800 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr20:25305400-25320400 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr20:25305400-25320800 Weak transcription Primary B cells from peripheral blood blood
24 chr20:25305400-25321000 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr20:25305400-25321000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr20:25305400-25335000 Weak transcription Primary B cells from cord blood blood
27 chr20:25306200-25317200 Weak transcription Fetal Intestine Large intestine
28 chr20:25306200-25317200 Weak transcription Thymus Thymus
29 chr20:25306200-25335800 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr20:25306400-25321600 Weak transcription Right Atrium heart
31 chr20:25307200-25317800 Weak transcription Primary monocytes fromperipheralblood blood
32 chr20:25307800-25318800 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr20:25309400-25325600 Weak transcription HSMM muscle
34 chr20:25309600-25318600 Weak transcription A549 lung
35 chr20:25309600-25321800 Weak transcription Left Ventricle heart
36 chr20:25309600-25333200 Weak transcription NHLF lung
37 chr20:25309800-25318200 Weak transcription Right Ventricle heart
38 chr20:25309800-25320200 Weak transcription Colonic Mucosa Colon
39 chr20:25309800-25320400 Weak transcription Ovary ovary
40 chr20:25309800-25323200 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr20:25309800-25325000 Weak transcription Brain Angular Gyrus brain
42 chr20:25309800-25325400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr20:25310000-25317200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr20:25310000-25317400 Weak transcription Spleen Spleen
45 chr20:25310000-25322400 Weak transcription Adipose Nuclei Adipose
46 chr20:25310200-25317200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr20:25310200-25317400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr20:25310200-25317800 Weak transcription Fetal Muscle Trunk muscle
49 chr20:25310200-25318000 Weak transcription Brain Substantia Nigra brain
50 chr20:25310200-25318000 Weak transcription Lung lung

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Last update: Aug 31, 2015