Variant report

Variant	rs364722
Chromosome Location	chr20:25460806-25460807
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 157 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:132)

rs_ID	r²[population]
rs1609701	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];0.82[YRI][hapmap];1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1888038	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2039400	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];0.90[YRI][hapmap];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2210053	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2258671	1.00[AMR][1000 genomes]
rs2258672	1.00[AMR][1000 genomes]
rs242122	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs242124	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs242125	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs242131	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];0.82[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs242134	0.82[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2474775	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2474776	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2482907	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2482909	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2482916	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2482917	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2482920	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2482922	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2482925	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2482929	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2482939	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];0.90[YRI][hapmap];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2482942	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2482945	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2500394	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2500396	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2500402	1.00[AMR][1000 genomes]
rs2500407	1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2500409	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2500412	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2500414	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2500416	1.00[ASN][1000 genomes]
rs2500419	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2500420	1.00[AMR][1000 genomes]
rs2500428	1.00[ASN][1000 genomes]
rs2500429	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2500431	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2500434	0.90[YRI][hapmap];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2500435	1.00[ASN][1000 genomes]
rs2500437	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2500438	0.90[YRI][hapmap];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2500440	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2500444	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2500445	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2500447	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs28801689	1.00[ASN][1000 genomes]
rs2892407	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2990514	1.00[ASN][1000 genomes]
rs2990515	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs3002699	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs3002700	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs3002703	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs366060	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs368636	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs368748	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs371447	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs378534	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs379538	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs380021	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs384336	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs388007	0.80[YRI][hapmap];1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs394798	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs400916	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs409873	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs409888	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs417446	1.00[GIH][hapmap];1.00[ASN][1000 genomes]
rs417662	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs423248	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs426143	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs428801	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs429120	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs430595	0.89[YRI][hapmap]
rs432403	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs439642	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs442728	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs448212	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs448866	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4815433	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4815434	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs518336	1.00[ASW][hapmap];0.87[GIH][hapmap];1.00[LWK][hapmap];0.94[MKK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56165312	1.00[ASN][1000 genomes]
rs56751491	1.00[ASN][1000 genomes]
rs57450264	1.00[ASN][1000 genomes]
rs59122217	1.00[ASN][1000 genomes]
rs59222176	1.00[ASN][1000 genomes]
rs6037089	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6037112	1.00[ASN][1000 genomes]
rs6037113	1.00[ASN][1000 genomes]
rs6037119	1.00[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6037147	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6037155	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6037160	1.00[ASN][1000 genomes]
rs6037172	1.00[ASN][1000 genomes]
rs6037177	1.00[ASN][1000 genomes]
rs6037185	1.00[ASN][1000 genomes]
rs6037194	1.00[ASN][1000 genomes]
rs6037197	1.00[ASN][1000 genomes]
rs6037200	1.00[ASN][1000 genomes]
rs60483717	1.00[ASN][1000 genomes]
rs6050591	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6050613	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6050618	1.00[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6050627	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6050628	0.89[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6050695	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6050711	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];0.82[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6050735	1.00[ASN][1000 genomes]
rs6050740	1.00[ASN][1000 genomes]
rs6050752	1.00[ASN][1000 genomes]
rs6050759	1.00[ASN][1000 genomes]
rs6050772	1.00[ASN][1000 genomes]
rs6050776	1.00[ASN][1000 genomes]
rs6050786	1.00[ASN][1000 genomes]
rs6076360	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6076365	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6083882	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];0.82[YRI][hapmap];0.96[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6083883	0.96[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6083887	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6115206	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6132844	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];0.82[YRI][hapmap];0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7263728	0.96[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73904476	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73904499	1.00[ASN][1000 genomes]
rs73907308	1.00[ASN][1000 genomes]
rs73907312	1.00[ASN][1000 genomes]
rs73907315	1.00[ASN][1000 genomes]
rs73907612	1.00[ASN][1000 genomes]
rs73907614	1.00[ASN][1000 genomes]
rs8116049	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs913790	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs913791	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];0.82[YRI][hapmap];1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs913793	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:25 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1063494	chr20:25067286-25468557	Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
2	nsv1063016	chr20:25067286-25475629	Enhancers Weak transcription Strong transcription Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
3	nsv1065101	chr20:25068046-25466542	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
4	nsv544220	chr20:25068046-25466542	Flanking Active TSS Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
5	nsv531480	chr20:25070067-25472684	Enhancers Flanking Active TSS Strong transcription Weak transcription Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
6	nsv585746	chr20:25071454-25470056	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
7	nsv1062742	chr20:25071454-25475629	Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
8	nsv949389	chr20:25071454-25506582	Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
9	nsv949479	chr20:25096494-25467359	Weak transcription Enhancers Bivalent Enhancer Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
10	nsv1061109	chr20:25101715-25472685	Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
11	nsv544221	chr20:25101715-25472685	Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
12	nsv482647	chr20:25308912-25481982	Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
13	nsv1056997	chr20:25316663-25492339	Strong transcription Weak transcription Genic enhancers Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
14	nsv1067379	chr20:25355484-25593240	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
15	nsv1060591	chr20:25388781-25628750	ZNF genes & repeats Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
16	nsv544223	chr20:25388781-25628750	ZNF genes & repeats Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
17	nsv1067441	chr20:25397566-25615439	Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
18	nsv912828	chr20:25433015-25595175	Weak transcription Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
19	nsv1062452	chr20:25438025-25590278	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
20	nsv1066066	chr20:25439367-25588016	Strong transcription Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
21	nsv544224	chr20:25439367-25588016	Genic enhancers ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
22	nsv912829	chr20:25444242-25595175	Strong transcription Enhancers Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
23	nsv912830	chr20:25449945-25595175	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
24	nsv912831	chr20:25449945-25595868	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
25	nsv962568	chr20:25460648-25462141	Strong transcription Enhancers Weak transcription Genic enhancers Bivalent Enhancer	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:92 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:25427200-25488200	Weak transcription	Stomach Mucosa	stomach
2	chr20:25429400-25463200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr20:25430200-25484400	Strong transcription	Fetal Stomach	stomach
4	chr20:25431800-25484200	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr20:25435800-25465600	Weak transcription	NH-A	brain
6	chr20:25436200-25465200	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr20:25438600-25466200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr20:25438800-25472600	Strong transcription	HepG2	liver
9	chr20:25440600-25466600	Weak transcription	Left Ventricle	heart
10	chr20:25446000-25466600	Weak transcription	NHDF-Ad	bronchial
11	chr20:25446000-25489600	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr20:25446400-25488200	Weak transcription	Right Atrium	heart
13	chr20:25447000-25477600	Strong transcription	Fetal Muscle Leg	muscle
14	chr20:25448200-25490600	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr20:25448600-25484200	Weak transcription	Duodenum Mucosa	Duodenum
16	chr20:25448800-25464600	Weak transcription	HUVEC	blood vessel
17	chr20:25448800-25480800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
18	chr20:25450000-25463000	Strong transcription	Liver	Liver
19	chr20:25451000-25461800	Weak transcription	Brain Cingulate Gyrus	brain
20	chr20:25451000-25462000	Weak transcription	Colonic Mucosa	Colon
21	chr20:25451200-25461400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr20:25451200-25474000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr20:25451400-25468400	Weak transcription	Osteobl	bone
24	chr20:25451400-25488800	Weak transcription	Rectal Smooth Muscle	rectum
25	chr20:25451600-25470000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
26	chr20:25451800-25468000	Weak transcription	HSMMtube	muscle
27	chr20:25453200-25463000	Strong transcription	Fetal Brain Female	brain
28	chr20:25453400-25462800	Strong transcription	Cortex derived primary cultured neurospheres	brain
29	chr20:25453400-25494400	Strong transcription	Brain Germinal Matrix	brain
30	chr20:25453600-25467200	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr20:25455200-25465200	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
32	chr20:25455800-25462800	Strong transcription	H1 Cell Line	embryonic stem cell
33	chr20:25455800-25462800	Strong transcription	iPS-20b Cell Line	embryonic stem cell
34	chr20:25455800-25462800	Strong transcription	Ovary	ovary
35	chr20:25456200-25462400	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr20:25456200-25463000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr20:25456200-25463000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
38	chr20:25456200-25466200	Strong transcription	Fetal Intestine Small	intestine
39	chr20:25456400-25461200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
40	chr20:25456400-25462800	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr20:25456400-25462800	Strong transcription	Aorta	Aorta
42	chr20:25456400-25462800	Strong transcription	Gastric	stomach
43	chr20:25456400-25463000	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
44	chr20:25456400-25470800	Strong transcription	Fetal Lung	lung
45	chr20:25456400-25472600	Strong transcription	Fetal Intestine Large	intestine
46	chr20:25456600-25462600	Strong transcription	Dnd41	blood
47	chr20:25456600-25462800	Strong transcription	Spleen	Spleen
48	chr20:25456600-25463000	Strong transcription	Placenta Amnion	Placenta Amnion
49	chr20:25456600-25463200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
50	chr20:25456600-25469600	Strong transcription	HUES6 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links