The 2.0 version of rSNPBase

Variant report

Variant rs56751491
Chromosome Location chr20:25658777-25658778
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25651600-25659600 Strong transcription Fetal Brain Female brain
2 chr20:25652000-25659600 Strong transcription Brain Germinal Matrix brain
3 chr20:25652600-25658800 Strong transcription Fetal Stomach stomach
4 chr20:25653000-25663600 Strong transcription HSMM muscle
5 chr20:25653200-25659600 Strong transcription Fetal Intestine Small intestine
6 chr20:25653200-25662800 Strong transcription Fetal Lung lung
7 chr20:25653400-25658800 Strong transcription Primary T regulatory cells fromperipheralblood blood
8 chr20:25653400-25659200 Strong transcription Primary hematopoietic stem cells blood
9 chr20:25653400-25659400 Strong transcription iPS-18 Cell Line embryonic stem cell
10 chr20:25653400-25659600 Strong transcription Brain Angular Gyrus brain
11 chr20:25653400-25659600 Strong transcription Fetal Muscle Trunk muscle
12 chr20:25653400-25659600 Strong transcription Ovary ovary
13 chr20:25653400-25659600 Strong transcription Skeletal Muscle Male skeletal muscle
14 chr20:25653400-25659600 Strong transcription Skeletal Muscle Female skeletal muscle
15 chr20:25653400-25661000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr20:25653400-25662400 Strong transcription Liver Liver
17 chr20:25653400-25663600 Strong transcription Dnd41 blood
18 chr20:25653400-25664200 Strong transcription Stomach Smooth Muscle stomach
19 chr20:25653600-25658800 Strong transcription HUES6 Cell Line embryonic stem cell
20 chr20:25653600-25658800 Strong transcription Rectal Smooth Muscle rectum
21 chr20:25653600-25659000 Strong transcription Brain Hippocampus Middle brain
22 chr20:25653600-25659600 Strong transcription Primary T cells from cord blood blood
23 chr20:25653600-25659600 Strong transcription Fetal Intestine Large intestine
24 chr20:25653600-25659600 Strong transcription Fetal Muscle Leg muscle
25 chr20:25653600-25659600 Strong transcription Fetal Thymus thymus
26 chr20:25653600-25659600 Strong transcription Left Ventricle heart
27 chr20:25653600-25660000 Strong transcription Primary T cells fromperipheralblood blood
28 chr20:25653600-25660200 Strong transcription Primary B cells from peripheral blood blood
29 chr20:25653600-25662600 Strong transcription HUES64 Cell Line embryonic stem cell
30 chr20:25653600-25663200 Strong transcription HepG2 liver
31 chr20:25653800-25659600 Strong transcription Primary T helper cells fromperipheralblood blood
32 chr20:25653800-25659600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr20:25653800-25659600 Strong transcription Duodenum Smooth Muscle Duodenum
34 chr20:25653800-25664200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr20:25654000-25658800 Strong transcription Primary hematopoietic stem cells short term culture blood
36 chr20:25654000-25659600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
37 chr20:25654000-25659600 Strong transcription Sigmoid Colon Sigmoid Colon
38 chr20:25654000-25659600 Strong transcription Monocytes-CD14+_RO01746 blood
39 chr20:25654000-25662600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr20:25654000-25663800 Weak transcription Small Intestine intestine
41 chr20:25654200-25659600 Strong transcription Thymus Thymus
42 chr20:25654400-25659600 Strong transcription Lung lung
43 chr20:25654600-25658800 Strong transcription Primary monocytes fromperipheralblood blood
44 chr20:25655000-25661400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr20:25655200-25659000 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr20:25655800-25658800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr20:25656400-25662600 Strong transcription Adipose Nuclei Adipose
48 chr20:25656600-25667200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr20:25656800-25658800 Genic enhancers Fetal Adrenal Gland Adrenal Gland
50 chr20:25656800-25660800 Weak transcription NH-A brain

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Last update: Aug 31, 2015