The 2.0 version of rSNPBase

Variant report

Variant rs6037172
Chromosome Location chr20:25614852-25614853
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25605400-25616800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr20:25605400-25628600 Weak transcription Left Ventricle heart
3 chr20:25605400-25630400 Weak transcription Aorta Aorta
4 chr20:25605600-25615000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr20:25605600-25615000 Weak transcription Primary T cells fromperipheralblood blood
6 chr20:25605600-25615000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr20:25605600-25615200 Weak transcription Adipose Nuclei Adipose
8 chr20:25605600-25615200 Weak transcription Brain Anterior Caudate brain
9 chr20:25605600-25616000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr20:25605600-25616400 Weak transcription Brain Inferior Temporal Lobe brain
11 chr20:25605600-25616400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr20:25605600-25616400 Weak transcription Thymus Thymus
13 chr20:25605600-25616600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr20:25605600-25616600 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr20:25605600-25616800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr20:25605600-25616800 Weak transcription Primary T cells from cord blood blood
17 chr20:25605600-25616800 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr20:25605600-25618000 Weak transcription NH-A brain
19 chr20:25605600-25619200 Weak transcription Liver Liver
20 chr20:25605600-25627000 Weak transcription Duodenum Mucosa Duodenum
21 chr20:25605600-25628400 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr20:25605600-25628600 Weak transcription Colon Smooth Muscle Colon
23 chr20:25605600-25630200 Weak transcription Fetal Intestine Large intestine
24 chr20:25605600-25635000 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr20:25605600-25654600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr20:25605800-25616800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
27 chr20:25606200-25616600 Weak transcription Fetal Muscle Leg muscle
28 chr20:25606200-25617600 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr20:25606200-25626400 Weak transcription A549 lung
30 chr20:25606600-25615000 Weak transcription Dnd41 blood
31 chr20:25607200-25615200 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr20:25607400-25615400 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr20:25607400-25616600 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr20:25607400-25617000 Weak transcription K562 blood
35 chr20:25607600-25617000 Weak transcription H1 Cell Line embryonic stem cell
36 chr20:25607800-25615200 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr20:25607800-25615200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr20:25607800-25623000 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr20:25609200-25653400 Weak transcription Brain Substantia Nigra brain
40 chr20:25610200-25630400 Weak transcription Ovary ovary
41 chr20:25610200-25635600 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr20:25610600-25625000 Weak transcription HSMMtube muscle
43 chr20:25610600-25626200 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr20:25610600-25630600 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr20:25611400-25653200 Weak transcription Fetal Intestine Small intestine
46 chr20:25611800-25615400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr20:25612200-25616600 Weak transcription Fetal Thymus thymus
48 chr20:25612400-25615000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr20:25612600-25617400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr20:25613000-25616400 Weak transcription Fetal Muscle Trunk muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015