The 2.0 version of rSNPBase

Variant report

Variant rs6037197
Chromosome Location chr20:25673459-25673460
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25657200-25674200 Weak transcription Fetal Heart heart
2 chr20:25657400-25676200 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr20:25657600-25676000 Weak transcription Stomach Mucosa stomach
4 chr20:25657600-25676200 Weak transcription Hela-S3 cervix
5 chr20:25657600-25676200 Weak transcription K562 blood
6 chr20:25657600-25676400 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr20:25657800-25676000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr20:25657800-25676200 Weak transcription H1 Cell Line embryonic stem cell
9 chr20:25657800-25676200 Weak transcription Colonic Mucosa Colon
10 chr20:25657800-25676200 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr20:25658200-25676200 Weak transcription Fetal Kidney kidney
12 chr20:25658400-25676200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr20:25658800-25676200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr20:25659000-25676000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr20:25660600-25676000 Weak transcription HUVEC blood vessel
16 chr20:25662400-25676000 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr20:25663800-25676000 Weak transcription HMEC breast
18 chr20:25664000-25675600 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr20:25664000-25676000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr20:25664000-25676000 Weak transcription Primary hematopoietic stem cells blood
21 chr20:25664200-25675200 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr20:25664200-25676000 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr20:25666400-25676000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr20:25666400-25676400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr20:25666800-25674200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr20:25666800-25676000 Weak transcription Brain Substantia Nigra brain
27 chr20:25666800-25676200 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr20:25666800-25676400 Weak transcription Ovary ovary
29 chr20:25667000-25675200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr20:25667000-25675400 Weak transcription Brain Cingulate Gyrus brain
31 chr20:25667000-25676000 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr20:25667000-25676000 Weak transcription Placenta Amnion Placenta Amnion
33 chr20:25667000-25676000 Weak transcription Spleen Spleen
34 chr20:25667000-25676000 Weak transcription NHEK skin
35 chr20:25667000-25676200 Weak transcription Primary monocytes fromperipheralblood blood
36 chr20:25667000-25676200 Weak transcription Liver Liver
37 chr20:25667000-25676200 Weak transcription Monocytes-CD14+_RO01746 blood
38 chr20:25667200-25674000 Weak transcription Lung lung
39 chr20:25667200-25675400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr20:25667200-25675400 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr20:25667200-25675400 Weak transcription Brain Inferior Temporal Lobe brain
42 chr20:25667200-25675600 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr20:25667200-25676000 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr20:25667200-25676000 Weak transcription Colon Smooth Muscle Colon
45 chr20:25667200-25676000 Weak transcription Rectal Smooth Muscle rectum
46 chr20:25667200-25676000 Weak transcription Stomach Smooth Muscle stomach
47 chr20:25667200-25676200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr20:25667200-25676200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr20:25667200-25676200 Weak transcription Right Ventricle heart
50 chr20:25667400-25675600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015