The 2.0 version of rSNPBase

Variant report

Variant rs6050759
Chromosome Location chr20:25630983-25630984
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25605600-25635000 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr20:25605600-25654600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr20:25609200-25653400 Weak transcription Brain Substantia Nigra brain
4 chr20:25610200-25635600 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr20:25611400-25653200 Weak transcription Fetal Intestine Small intestine
6 chr20:25613400-25635000 Weak transcription Hela-S3 cervix
7 chr20:25613600-25635400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr20:25614400-25632400 Weak transcription Osteobl bone
9 chr20:25614600-25635000 Weak transcription NHEK skin
10 chr20:25616000-25653600 Weak transcription Adipose Nuclei Adipose
11 chr20:25617000-25650400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr20:25617400-25640400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr20:25617600-25653400 Weak transcription Fetal Muscle Trunk muscle
14 chr20:25617800-25635000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr20:25618400-25632200 Weak transcription Primary T cells from cord blood blood
16 chr20:25618400-25653600 Weak transcription Primary B cells from peripheral blood blood
17 chr20:25618400-25653600 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr20:25623200-25653600 Weak transcription Pancreas Pancrea
19 chr20:25624000-25635400 Weak transcription HepG2 liver
20 chr20:25624800-25631800 Weak transcription GM12878-XiMat blood
21 chr20:25625000-25655200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr20:25625200-25641600 Weak transcription Dnd41 blood
23 chr20:25626400-25653600 Weak transcription Fetal Muscle Leg muscle
24 chr20:25626800-25632400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr20:25626800-25634800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr20:25626800-25654000 Weak transcription Gastric stomach
27 chr20:25627000-25632600 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr20:25627400-25640600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr20:25628200-25653600 Weak transcription Esophagus oesophagus
30 chr20:25628600-25636600 Weak transcription A549 lung
31 chr20:25628800-25631400 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr20:25628800-25640600 Weak transcription Fetal Thymus thymus
33 chr20:25628800-25653400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr20:25628800-25653400 Weak transcription Primary hematopoietic stem cells blood
35 chr20:25628800-25653400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr20:25629000-25635000 Weak transcription HSMMtube muscle
37 chr20:25629000-25649000 Weak transcription Thymus Thymus
38 chr20:25629000-25649200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr20:25629000-25652200 Weak transcription Liver Liver
40 chr20:25629000-25653400 Weak transcription Stomach Smooth Muscle stomach
41 chr20:25629000-25653600 Weak transcription Brain Hippocampus Middle brain
42 chr20:25629000-25653600 Weak transcription Brain Inferior Temporal Lobe brain
43 chr20:25629000-25653800 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr20:25629200-25650800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr20:25629400-25635600 Weak transcription Left Ventricle heart
46 chr20:25629400-25650400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr20:25629400-25650400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr20:25629600-25638800 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015