Variant report

Variant rs429120
Chromosome Location chr20:25452385-25452386
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25425600-25453200 Weak transcription Small Intestine intestine
2 chr20:25427200-25488200 Weak transcription Stomach Mucosa stomach
3 chr20:25429400-25463200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr20:25429800-25458800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr20:25430200-25484400 Strong transcription Fetal Stomach stomach
6 chr20:25431800-25484200 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr20:25432600-25452400 Strong transcription Breast Myoepithelial Primary Cells Breast
8 chr20:25434400-25460800 Weak transcription Fetal Heart heart
9 chr20:25435600-25459000 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr20:25435800-25465600 Weak transcription NH-A brain
11 chr20:25436200-25465200 Weak transcription Muscle Satellite Cultured Cells --
12 chr20:25437800-25454600 Strong transcription Fetal Adrenal Gland Adrenal Gland
13 chr20:25438000-25452600 Strong transcription Brain Germinal Matrix brain
14 chr20:25438000-25456400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr20:25438200-25452400 Strong transcription Fetal Brain Female brain
16 chr20:25438400-25452600 Strong transcription Ovary ovary
17 chr20:25438400-25455400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr20:25438600-25453200 Strong transcription Fetal Intestine Small intestine
19 chr20:25438600-25466200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr20:25438800-25455000 Strong transcription Fetal Intestine Large intestine
21 chr20:25438800-25472600 Strong transcription HepG2 liver
22 chr20:25440600-25466600 Weak transcription Left Ventricle heart
23 chr20:25441800-25455000 Strong transcription iPS-20b Cell Line embryonic stem cell
24 chr20:25442200-25460000 Weak transcription Brain Angular Gyrus brain
25 chr20:25443200-25459000 Weak transcription Brain Inferior Temporal Lobe brain
26 chr20:25443800-25457400 Strong transcription iPS-18 Cell Line embryonic stem cell
27 chr20:25444200-25452600 Strong transcription Duodenum Smooth Muscle Duodenum
28 chr20:25446000-25459600 Weak transcription Fetal Brain Male brain
29 chr20:25446000-25466600 Weak transcription NHDF-Ad bronchial
30 chr20:25446000-25489600 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr20:25446400-25452400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr20:25446400-25455200 Strong transcription Fetal Muscle Trunk muscle
33 chr20:25446400-25488200 Weak transcription Right Atrium heart
34 chr20:25446600-25457000 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr20:25447000-25477600 Strong transcription Fetal Muscle Leg muscle
36 chr20:25448200-25490600 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr20:25448400-25456600 Weak transcription Placenta Amnion Placenta Amnion
38 chr20:25448400-25458800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr20:25448400-25459000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr20:25448600-25484200 Weak transcription Duodenum Mucosa Duodenum
41 chr20:25448800-25453600 Weak transcription Brain Substantia Nigra brain
42 chr20:25448800-25464600 Weak transcription HUVEC blood vessel
43 chr20:25448800-25480800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr20:25449000-25459000 Weak transcription Adipose Nuclei Adipose
45 chr20:25449000-25459400 Weak transcription Right Ventricle heart
46 chr20:25449400-25459000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr20:25449800-25456800 Weak transcription Lung lung
48 chr20:25450000-25463000 Strong transcription Liver Liver
49 chr20:25450200-25455400 Strong transcription Fetal Lung lung
50 chr20:25450400-25452400 Genic enhancers Fetal Thymus thymus

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