Variant report

Variant rs430595
Chromosome Location chr20:25474283-25474284
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25427200-25488200 Weak transcription Stomach Mucosa stomach
2 chr20:25430200-25484400 Strong transcription Fetal Stomach stomach
3 chr20:25431800-25484200 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr20:25446000-25489600 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr20:25446400-25488200 Weak transcription Right Atrium heart
6 chr20:25447000-25477600 Strong transcription Fetal Muscle Leg muscle
7 chr20:25448200-25490600 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr20:25448600-25484200 Weak transcription Duodenum Mucosa Duodenum
9 chr20:25448800-25480800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr20:25451400-25488800 Weak transcription Rectal Smooth Muscle rectum
11 chr20:25453400-25494400 Strong transcription Brain Germinal Matrix brain
12 chr20:25457800-25489000 Weak transcription Placenta Placenta
13 chr20:25459800-25489800 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr20:25462800-25474800 Weak transcription Right Ventricle heart
15 chr20:25462800-25488200 Weak transcription Colonic Mucosa Colon
16 chr20:25464000-25474600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr20:25464200-25474400 Strong transcription Duodenum Smooth Muscle Duodenum
18 chr20:25465000-25483000 Weak transcription Brain Cingulate Gyrus brain
19 chr20:25465400-25481600 Weak transcription Brain Inferior Temporal Lobe brain
20 chr20:25465600-25490000 Weak transcription Brain Angular Gyrus brain
21 chr20:25465800-25488000 Weak transcription Fetal Kidney kidney
22 chr20:25466000-25484200 Weak transcription Fetal Brain Male brain
23 chr20:25466200-25477400 Weak transcription Muscle Satellite Cultured Cells --
24 chr20:25467400-25484200 Weak transcription Left Ventricle heart
25 chr20:25467400-25491800 Weak transcription Primary T cells from cord blood blood
26 chr20:25467600-25488000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr20:25467800-25476400 Strong transcription A549 lung
28 chr20:25468600-25484200 Weak transcription HUVEC blood vessel
29 chr20:25469000-25477400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr20:25469800-25477400 Weak transcription HSMMtube muscle
31 chr20:25469800-25484200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr20:25470000-25475800 Weak transcription Brain Substantia Nigra brain
33 chr20:25470000-25477400 Weak transcription Colon Smooth Muscle Colon
34 chr20:25470000-25483000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr20:25470000-25488000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr20:25470000-25488000 Weak transcription Osteobl bone
37 chr20:25470200-25475600 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr20:25470200-25484200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr20:25470600-25477400 Weak transcription H9 Cell Line embryonic stem cell
40 chr20:25470600-25484200 Weak transcription NHLF lung
41 chr20:25470800-25480800 Weak transcription Fetal Lung lung
42 chr20:25470800-25484200 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr20:25470800-25484400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr20:25471000-25475800 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr20:25471000-25488200 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr20:25471400-25482400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr20:25471400-25483000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr20:25471600-25475000 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr20:25471800-25476000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr20:25472000-25475000 Weak transcription iPS-15b Cell Line embryonic stem cell

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