Variant report

Variant rs2517422
Chromosome Location chr6:30950589-30950590
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30949600-30950600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
2 chr6:30949600-30950600 Flanking Active TSS Osteobl bone
3 chr6:30949600-30950800 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr6:30949600-30951600 Enhancers Stomach Mucosa stomach
5 chr6:30949800-30950600 Enhancers H9 Cell Line embryonic stem cell
6 chr6:30949800-30950600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr6:30949800-30950600 Enhancers Colon Smooth Muscle Colon
8 chr6:30949800-30950600 Enhancers Fetal Stomach stomach
9 chr6:30949800-30950600 Bivalent Enhancer K562 blood
10 chr6:30949800-30950600 Flanking Active TSS NHEK skin
11 chr6:30949800-30950800 Flanking Active TSS Esophagus oesophagus
12 chr6:30949800-30950800 Enhancers Left Ventricle heart
13 chr6:30949800-30950800 Enhancers Pancreas Pancrea
14 chr6:30949800-30950800 Enhancers Psoas Muscle Psoas
15 chr6:30949800-30951400 Enhancers Lung lung
16 chr6:30950200-30950600 Enhancers H1 Cell Line embryonic stem cell
17 chr6:30950200-30950600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
18 chr6:30950200-30950600 Flanking Active TSS Fetal Heart heart
19 chr6:30950200-30950600 Enhancers Fetal Lung lung
20 chr6:30950200-30950600 Enhancers Placenta Amnion Placenta Amnion
21 chr6:30950200-30950600 Enhancers NH-A brain
22 chr6:30950200-30951400 Enhancers Gastric stomach
23 chr6:30950200-30951400 Enhancers Right Ventricle heart
24 chr6:30950400-30950600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr6:30950400-30950600 Enhancers HUES48 Cell Line embryonic stem cell
26 chr6:30950400-30950600 Enhancers iPS-15b Cell Line embryonic stem cell
27 chr6:30950400-30950600 Enhancers iPS-18 Cell Line embryonic stem cell
28 chr6:30950400-30950600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr6:30950400-30950600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr6:30950400-30950600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr6:30950400-30950600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
32 chr6:30950400-30950600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr6:30950400-30950600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr6:30950400-30950600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
35 chr6:30950400-30950600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr6:30950400-30950600 Enhancers Fetal Kidney kidney
37 chr6:30950400-30950600 Enhancers HMEC breast
38 chr6:30950400-30950800 Enhancers ES-I3 Cell Line embryonic stem cell
39 chr6:30950400-30950800 Enhancers HUES6 Cell Line embryonic stem cell
40 chr6:30950400-30950800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr6:30950400-30950800 Bivalent Enhancer Fetal Muscle Leg muscle
42 chr6:30950400-30950800 Enhancers Ovary ovary
43 chr6:30950400-30950800 Enhancers Right Atrium heart
44 chr6:30950400-30950800 Enhancers Skeletal Muscle Male skeletal muscle
45 chr6:30950400-30950800 Enhancers Skeletal Muscle Female skeletal muscle
46 chr6:30950400-30950800 Enhancers NHDF-Ad bronchial
47 chr6:30950400-30951000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
48 chr6:30950400-30958200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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