Variant report

Variant rs2844678
Chromosome Location chr6:30950050-30950051
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30933000-30950200 Weak transcription Gastric stomach
2 chr6:30949200-30950400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr6:30949600-30950200 Active TSS NHDF-Ad bronchial
4 chr6:30949600-30950400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr6:30949600-30950400 Enhancers Cortex derived primary cultured neurospheres brain
6 chr6:30949600-30950400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr6:30949600-30950400 Enhancers Liver Liver
8 chr6:30949600-30950400 Flanking Active TSS Fetal Kidney kidney
9 chr6:30949600-30950400 Enhancers Fetal Muscle Leg muscle
10 chr6:30949600-30950400 Enhancers Placenta Placenta
11 chr6:30949600-30950400 Bivalent/Poised TSS Stomach Smooth Muscle stomach
12 chr6:30949600-30950400 Flanking Active TSS HMEC breast
13 chr6:30949600-30950600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr6:30949600-30950600 Flanking Active TSS Osteobl bone
15 chr6:30949600-30950800 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr6:30949600-30951600 Enhancers Stomach Mucosa stomach
17 chr6:30949800-30950200 Flanking Active TSS H1 Cell Line embryonic stem cell
18 chr6:30949800-30950200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
19 chr6:30949800-30950200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr6:30949800-30950200 Flanking Active TSS Duodenum Mucosa Duodenum
21 chr6:30949800-30950200 Flanking Active TSS Fetal Lung lung
22 chr6:30949800-30950200 Flanking Active TSS NH-A brain
23 chr6:30949800-30950200 Active TSS NHLF lung
24 chr6:30949800-30950400 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
25 chr6:30949800-30950400 Active TSS ES-WA7 Cell Line embryonic stem cell
26 chr6:30949800-30950400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr6:30949800-30950400 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
28 chr6:30949800-30950400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr6:30949800-30950400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
30 chr6:30949800-30950400 Flanking Active TSS HUES64 Cell Line embryonic stem cell
31 chr6:30949800-30950400 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
32 chr6:30949800-30950400 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
33 chr6:30949800-30950400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
34 chr6:30949800-30950400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr6:30949800-30950400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
36 chr6:30949800-30950400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr6:30949800-30950400 Flanking Active TSS Adipose Nuclei Adipose
38 chr6:30949800-30950400 Enhancers Duodenum Smooth Muscle Duodenum
39 chr6:30949800-30950400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
40 chr6:30949800-30950400 Flanking Active TSS Ovary ovary
41 chr6:30949800-30950400 Flanking Active TSS Right Atrium heart
42 chr6:30949800-30950400 Bivalent Enhancer HepG2 liver
43 chr6:30949800-30950600 Enhancers H9 Cell Line embryonic stem cell
44 chr6:30949800-30950600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
45 chr6:30949800-30950600 Enhancers Colon Smooth Muscle Colon
46 chr6:30949800-30950600 Enhancers Fetal Stomach stomach
47 chr6:30949800-30950600 Bivalent Enhancer K562 blood
48 chr6:30949800-30950600 Flanking Active TSS NHEK skin
49 chr6:30949800-30950800 Flanking Active TSS Esophagus oesophagus
50 chr6:30949800-30950800 Enhancers Left Ventricle heart

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