Variant report

Variant rs2554013
Chromosome Location chr11:36394685-36394686
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:36386600-36394800 Weak transcription Fetal Kidney kidney
2 chr11:36388000-36397200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr11:36388600-36397000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr11:36389600-36397600 Weak transcription Spleen Spleen
5 chr11:36391600-36397400 Enhancers Fetal Intestine Large intestine
6 chr11:36392200-36397400 Enhancers Fetal Intestine Small intestine
7 chr11:36392800-36395600 Enhancers Duodenum Mucosa Duodenum
8 chr11:36393200-36394800 Enhancers Sigmoid Colon Sigmoid Colon
9 chr11:36393600-36394800 Enhancers NH-A brain
10 chr11:36393600-36395600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr11:36393800-36394800 Enhancers Brain Substantia Nigra brain
12 chr11:36393800-36394800 Enhancers Fetal Lung lung
13 chr11:36393800-36395000 Enhancers Brain Angular Gyrus brain
14 chr11:36393800-36395200 Enhancers Brain Hippocampus Middle brain
15 chr11:36393800-36395200 Enhancers Monocytes-CD14+_RO01746 blood
16 chr11:36393800-36395400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr11:36393800-36395600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr11:36393800-36397200 Enhancers Primary hematopoietic stem cells short term culture blood
19 chr11:36394000-36394800 Enhancers Brain Anterior Caudate brain
20 chr11:36394000-36394800 Enhancers Brain Cingulate Gyrus brain
21 chr11:36394000-36394800 Enhancers Pancreas Pancrea
22 chr11:36394000-36394800 Enhancers Rectal Mucosa Donor 31 rectum
23 chr11:36394000-36395000 Flanking Active TSS A549 lung
24 chr11:36394000-36395600 Enhancers Adipose Nuclei Adipose
25 chr11:36394200-36394800 Enhancers Small Intestine intestine
26 chr11:36394200-36397400 Weak transcription Colonic Mucosa Colon
27 chr11:36394200-36397600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr11:36394200-36397600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr11:36394400-36394800 Enhancers Rectal Mucosa Donor 29 rectum
30 chr11:36394400-36395000 Enhancers Muscle Satellite Cultured Cells --
31 chr11:36394400-36395000 Enhancers HSMM muscle
32 chr11:36394400-36395600 Enhancers Osteobl bone
33 chr11:36394400-36396400 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr11:36394400-36396800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr11:36394400-36397000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr11:36394400-36397400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr11:36394400-36397400 Weak transcription Ovary ovary
38 chr11:36394400-36397400 Weak transcription HMEC breast
39 chr11:36394400-36397600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr11:36394400-36397800 Weak transcription Gastric stomach
41 chr11:36394600-36396800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr11:36394600-36396800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr11:36394600-36397200 Weak transcription Brain Inferior Temporal Lobe brain
44 chr11:36394600-36397400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr11:36394600-36397400 Weak transcription Hela-S3 cervix
46 chr11:36394600-36397600 Weak transcription Stomach Mucosa stomach
47 chr11:36394600-36397600 Weak transcription HSMMtube muscle

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