Variant report

Variant rs2571402
Chromosome Location chr6:29932380-29932381
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29913400-29932600 Weak transcription Brain Substantia Nigra brain
2 chr6:29916800-29933000 Weak transcription Esophagus oesophagus
3 chr6:29916800-29933000 Weak transcription Pancreas Pancrea
4 chr6:29916800-29933200 Weak transcription Lung lung
5 chr6:29916800-29940200 Weak transcription Gastric stomach
6 chr6:29924800-29933000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr6:29926200-29932600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr6:29927800-29938800 Weak transcription Spleen Spleen
9 chr6:29931800-29932400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr6:29931800-29932400 Enhancers Primary T cells from cord blood blood
11 chr6:29931800-29932400 Enhancers Primary T helper naive cells from peripheral blood blood
12 chr6:29931800-29932400 Enhancers Primary T helper cells PMA-I stimulated --
13 chr6:29931800-29932400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
14 chr6:29931800-29932400 Enhancers Fetal Adrenal Gland Adrenal Gland
15 chr6:29931800-29932400 Enhancers Fetal Thymus thymus
16 chr6:29931800-29932800 Enhancers Primary monocytes fromperipheralblood blood
17 chr6:29931800-29932800 Enhancers Primary T helper cells fromperipheralblood blood
18 chr6:29932000-29932400 Enhancers Primary T helper naive cells fromperipheralblood blood
19 chr6:29932000-29932400 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr6:29932000-29932400 Enhancers HUVEC blood vessel
21 chr6:29932000-29932600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
22 chr6:29932000-29932600 Enhancers Cortex derived primary cultured neurospheres brain
23 chr6:29932000-29932800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
24 chr6:29932000-29932800 Enhancers NHDF-Ad bronchial
25 chr6:29932000-29934200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr6:29932200-29932400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr6:29932200-29932400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr6:29932200-29932400 Enhancers iPS-15b Cell Line embryonic stem cell
29 chr6:29932200-29932400 Enhancers iPS-18 Cell Line embryonic stem cell
30 chr6:29932200-29932400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
31 chr6:29932200-29932400 Enhancers Primary T killer memory cells from peripheral blood blood
32 chr6:29932200-29932400 Enhancers Brain Hippocampus Middle brain
33 chr6:29932200-29932400 Enhancers Duodenum Mucosa Duodenum
34 chr6:29932200-29932400 Enhancers Duodenum Smooth Muscle Duodenum
35 chr6:29932200-29932400 Flanking Active TSS Left Ventricle heart
36 chr6:29932200-29932400 Enhancers Psoas Muscle Psoas
37 chr6:29932200-29932400 Enhancers Rectal Mucosa Donor 29 rectum
38 chr6:29932200-29932400 Enhancers Rectal Smooth Muscle rectum
39 chr6:29932200-29932400 Flanking Active TSS Right Atrium heart
40 chr6:29932200-29932400 Enhancers Right Ventricle heart
41 chr6:29932200-29932400 Flanking Active TSS Sigmoid Colon Sigmoid Colon
42 chr6:29932200-29932400 Enhancers Thymus Thymus
43 chr6:29932200-29932400 Enhancers NHEK skin
44 chr6:29932200-29932600 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
45 chr6:29932200-29932600 Enhancers H1 Cell Line embryonic stem cell
46 chr6:29932200-29932600 Enhancers H9 Cell Line embryonic stem cell
47 chr6:29932200-29932600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr6:29932200-29932600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
49 chr6:29932200-29932600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr6:29932200-29932600 Flanking Active TSS Primary hematopoietic stem cells blood

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