The 2.0 version of rSNPBase

Variant report

Variant rs261949
Chromosome Location chr6:30270080-30270081
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30256000-30270200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr6:30256200-30292000 Weak transcription Fetal Heart heart
3 chr6:30257600-30292800 Weak transcription Fetal Kidney kidney
4 chr6:30259000-30287200 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr6:30262200-30270200 Weak transcription Fetal Brain Male brain
6 chr6:30262600-30270200 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr6:30262600-30270200 Weak transcription Colonic Mucosa Colon
8 chr6:30262600-30270200 Weak transcription Rectal Smooth Muscle rectum
9 chr6:30262600-30270400 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr6:30262600-30271800 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr6:30262600-30271800 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr6:30262600-30279200 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr6:30262600-30279600 Weak transcription Small Intestine intestine
14 chr6:30262600-30292400 Weak transcription Pancreas Pancrea
15 chr6:30262800-30280200 Weak transcription HUVEC blood vessel
16 chr6:30262800-30280400 Weak transcription Brain Cingulate Gyrus brain
17 chr6:30262800-30283200 Weak transcription NHLF lung
18 chr6:30262800-30290200 Weak transcription Spleen Spleen
19 chr6:30263000-30270200 Weak transcription Fetal Lung lung
20 chr6:30263000-30271400 Weak transcription Osteobl bone
21 chr6:30263000-30277200 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr6:30263000-30280000 Weak transcription Placenta Amnion Placenta Amnion
23 chr6:30263000-30281400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr6:30263000-30282000 Weak transcription Psoas Muscle Psoas
25 chr6:30263000-30293000 Weak transcription Brain Substantia Nigra brain
26 chr6:30263200-30270200 Weak transcription Esophagus oesophagus
27 chr6:30263200-30271600 Weak transcription Thymus Thymus
28 chr6:30263200-30280200 Weak transcription HSMMtube muscle
29 chr6:30263200-30280600 Weak transcription Brain Inferior Temporal Lobe brain
30 chr6:30263200-30281600 Weak transcription Right Ventricle heart
31 chr6:30263400-30270200 Weak transcription Fetal Muscle Trunk muscle
32 chr6:30263400-30270200 Weak transcription Left Ventricle heart
33 chr6:30263600-30270200 Weak transcription HMEC breast
34 chr6:30263800-30270200 Weak transcription GM12878-XiMat blood
35 chr6:30263800-30271800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr6:30263800-30280800 Weak transcription Brain Hippocampus Middle brain
37 chr6:30264000-30270200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr6:30264000-30270200 Weak transcription Brain Anterior Caudate brain
39 chr6:30264000-30270400 Weak transcription Placenta Placenta
40 chr6:30264000-30271800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr6:30264000-30280800 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr6:30264200-30270200 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr6:30264200-30270200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr6:30264200-30270200 Weak transcription Aorta Aorta
45 chr6:30264200-30270200 Weak transcription Lung lung
46 chr6:30264200-30270200 Weak transcription Ovary ovary
47 chr6:30264200-30270200 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr6:30264200-30270200 Weak transcription Stomach Smooth Muscle stomach
49 chr6:30264200-30280200 Weak transcription NH-A brain
50 chr6:30264200-30286600 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015