The 2.0 version of rSNPBase

Variant report

Variant rs2619687
Chromosome Location chr15:51174341-51174342
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:51151200-51177400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr15:51163600-51176400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr15:51168800-51175800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr15:51169200-51178200 Weak transcription Right Ventricle heart
5 chr15:51169200-51180000 Weak transcription Right Atrium heart
6 chr15:51169400-51176000 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr15:51169400-51177400 Weak transcription Primary T cells fromperipheralblood blood
8 chr15:51169600-51174800 Enhancers Dnd41 blood
9 chr15:51169600-51175800 Weak transcription Esophagus oesophagus
10 chr15:51169600-51176000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr15:51169600-51176200 Weak transcription Adipose Nuclei Adipose
12 chr15:51169600-51176200 Weak transcription Duodenum Mucosa Duodenum
13 chr15:51169600-51176200 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr15:51169600-51177400 Weak transcription Brain Anterior Caudate brain
15 chr15:51169600-51177400 Weak transcription Fetal Muscle Leg muscle
16 chr15:51169600-51177600 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr15:51170000-51176200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr15:51171000-51174800 Enhancers NHEK skin
19 chr15:51171000-51177800 Enhancers Primary monocytes fromperipheralblood blood
20 chr15:51171200-51174600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr15:51171200-51174800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr15:51171400-51174600 Enhancers Primary neutrophils fromperipheralblood blood
23 chr15:51171600-51176200 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr15:51171600-51177400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr15:51171800-51177000 Weak transcription Small Intestine intestine
26 chr15:51172200-51174800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr15:51172400-51174600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr15:51172400-51174600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr15:51172400-51174600 Enhancers Primary hematopoietic stem cells short term culture blood
30 chr15:51172400-51174600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr15:51172400-51174800 Enhancers A549 lung
32 chr15:51172400-51174800 Enhancers HMEC breast
33 chr15:51172600-51177400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr15:51172800-51175800 Weak transcription Primary hematopoietic stem cells blood
35 chr15:51172800-51176000 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr15:51173000-51177400 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr15:51173200-51175000 Enhancers Monocytes-CD14+_RO01746 blood
38 chr15:51173400-51175400 Enhancers Placenta Placenta
39 chr15:51173400-51175800 Weak transcription Primary B cells from cord blood blood
40 chr15:51173400-51175800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr15:51173400-51176200 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr15:51173600-51175800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr15:51173600-51175800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr15:51173600-51176000 Weak transcription HUVEC blood vessel
45 chr15:51173600-51176000 Weak transcription NHDF-Ad bronchial
46 chr15:51173600-51176200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr15:51173600-51176200 Weak transcription HSMMtube muscle
48 chr15:51173600-51177600 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr15:51173600-51177800 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr15:51173800-51175800 Enhancers GM12878-XiMat blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015