Variant report

Variant rs7171085
Chromosome Location chr15:51257312-51257313
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:51201800-51271600 Weak transcription H9 Cell Line embryonic stem cell
2 chr15:51210600-51298400 Weak transcription Stomach Mucosa stomach
3 chr15:51235200-51263800 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr15:51242800-51258200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr15:51243600-51261400 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr15:51243800-51283000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr15:51246800-51257800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr15:51249800-51260800 Weak transcription Esophagus oesophagus
9 chr15:51250400-51264800 Weak transcription NHEK skin
10 chr15:51251600-51257800 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr15:51251600-51259600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
12 chr15:51251600-51261200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr15:51251800-51257800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr15:51251800-51259400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr15:51251800-51260000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr15:51252200-51260800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr15:51252200-51261200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr15:51252200-51262400 Weak transcription H1 Cell Line embryonic stem cell
19 chr15:51252200-51263400 Weak transcription NHLF lung
20 chr15:51252400-51257600 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr15:51252400-51283800 Weak transcription Placenta Amnion Placenta Amnion
22 chr15:51253200-51257400 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr15:51253200-51258200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr15:51253400-51260600 Weak transcription Hela-S3 cervix
25 chr15:51253400-51265600 Weak transcription HMEC breast
26 chr15:51253600-51261000 Weak transcription Fetal Thymus thymus
27 chr15:51253600-51261400 Weak transcription HUES48 Cell Line embryonic stem cell
28 chr15:51253600-51262200 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr15:51253800-51259400 Weak transcription Osteobl bone
30 chr15:51253800-51260400 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr15:51253800-51262200 Weak transcription NHDF-Ad bronchial
32 chr15:51253800-51262400 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr15:51253800-51262400 Weak transcription NH-A brain
34 chr15:51254000-51260800 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr15:51254000-51261200 Weak transcription Fetal Kidney kidney
36 chr15:51254400-51258000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
37 chr15:51254600-51261000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr15:51254600-51261400 Weak transcription Muscle Satellite Cultured Cells --
39 chr15:51255000-51257600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
40 chr15:51255400-51257600 ZNF genes & repeats HSMM muscle
41 chr15:51255600-51258000 ZNF genes & repeats Fetal Brain Female brain
42 chr15:51255600-51261200 Weak transcription Brain Angular Gyrus brain
43 chr15:51255800-51258000 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
44 chr15:51255800-51261200 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr15:51255800-51263200 Weak transcription HUVEC blood vessel
46 chr15:51256000-51258400 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
47 chr15:51256400-51258000 ZNF genes & repeats Primary B cells from peripheral blood blood
48 chr15:51256600-51257400 ZNF genes & repeats Primary T cells fromperipheralblood blood
49 chr15:51256600-51257800 ZNF genes & repeats Primary B cells from cord blood blood
50 chr15:51256600-51258400 ZNF genes & repeats Primary neutrophils fromperipheralblood blood

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