Variant report

Variant rs2666562
Chromosome Location chr11:64405409-64405410
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:64397400-64406000 Weak transcription NHDF-Ad bronchial
2 chr11:64400200-64408200 Weak transcription HSMM muscle
3 chr11:64401800-64405800 Weak transcription Primary hematopoietic stem cells blood
4 chr11:64402600-64405800 Weak transcription HSMMtube muscle
5 chr11:64403000-64410400 Weak transcription Aorta Aorta
6 chr11:64403200-64407400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr11:64403400-64407000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr11:64403400-64407800 Weak transcription Osteobl bone
9 chr11:64404200-64406400 Enhancers Brain Substantia Nigra brain
10 chr11:64404400-64405600 Enhancers Primary Natural Killer cells fromperipheralblood blood
11 chr11:64404400-64405600 Bivalent Enhancer Fetal Muscle Leg muscle
12 chr11:64404400-64406600 Enhancers Primary B cells from peripheral blood blood
13 chr11:64404800-64406200 Bivalent Enhancer Placenta Placenta
14 chr11:64404800-64406400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
15 chr11:64405000-64405600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr11:64405000-64405600 Enhancers Primary B cells from cord blood blood
17 chr11:64405000-64405600 Bivalent Enhancer Fetal Thymus thymus
18 chr11:64405000-64405600 Flanking Active TSS Rectal Smooth Muscle rectum
19 chr11:64405000-64405800 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin01 Skin
20 chr11:64405000-64405800 Enhancers Fetal Lung lung
21 chr11:64405000-64406200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
22 chr11:64405000-64406400 Active TSS Brain Angular Gyrus brain
23 chr11:64405200-64405600 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
24 chr11:64405200-64405600 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr11:64405200-64405600 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
26 chr11:64405200-64405600 Bivalent Enhancer Breast Myoepithelial Primary Cells Breast
27 chr11:64405200-64405600 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr11:64405200-64405600 Bivalent Enhancer Esophagus oesophagus
29 chr11:64405200-64405600 Flanking Active TSS Fetal Intestine Large intestine
30 chr11:64405200-64405600 Flanking Active TSS Fetal Intestine Small intestine
31 chr11:64405200-64405600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
32 chr11:64405200-64405600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
33 chr11:64405200-64405600 Enhancers Sigmoid Colon Sigmoid Colon
34 chr11:64405200-64405800 Bivalent Enhancer Adipose Nuclei Adipose
35 chr11:64405200-64405800 Flanking Bivalent TSS/Enh Stomach Smooth Muscle stomach
36 chr11:64405200-64406000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
37 chr11:64405200-64406000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
38 chr11:64405200-64406000 Active TSS Brain Anterior Caudate brain
39 chr11:64405200-64406000 Flanking Active TSS Colonic Mucosa Colon
40 chr11:64405200-64406000 Active TSS Fetal Kidney kidney
41 chr11:64405200-64406000 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
42 chr11:64405200-64406000 Flanking Bivalent TSS/Enh Fetal Stomach stomach
43 chr11:64405200-64406200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
44 chr11:64405200-64406200 Active TSS H9 Cell Line embryonic stem cell
45 chr11:64405200-64406200 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
46 chr11:64405200-64406400 Flanking Active TSS Fetal Brain Male brain
47 chr11:64405200-64408000 Enhancers Spleen Spleen
48 chr11:64405400-64405600 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
49 chr11:64405400-64405600 Flanking Active TSS iPS DF 6.9 Cell Line embryonic stem cell
50 chr11:64405400-64405600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell

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