Variant report

Variant	rs2667031
Chromosome Location	chr2:160916335-160916336
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:160914183..160918448-chr2:160920059..160924160,4	K562	blood:

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10454740	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10803761	0.93[EUR][1000 genomes]
rs11887337	0.84[EUR][1000 genomes]
rs12614284	0.89[ASN][1000 genomes]
rs12692582	0.81[EUR][1000 genomes]
rs12999707	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13031600	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13394776	0.81[EUR][1000 genomes]
rs1457233	0.83[EUR][1000 genomes]
rs1457241	0.83[EUR][1000 genomes]
rs17341294	0.89[ASN][1000 genomes]
rs2357773	0.83[EUR][1000 genomes]
rs2667033	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2715929	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3792194	0.89[ASN][1000 genomes]
rs3792196	0.89[ASN][1000 genomes]
rs4129787	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4233679	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4233680	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4324285	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4368286	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4399677	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4665149	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4665155	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55713072	0.88[ASN][1000 genomes]
rs55853219	0.93[ASN][1000 genomes]
rs6432582	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6432587	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6432590	0.94[EUR][1000 genomes]
rs6432593	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6432603	0.83[EUR][1000 genomes]
rs6720128	0.80[EUR][1000 genomes]
rs6729540	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6749513	0.93[EUR][1000 genomes]
rs6752593	1.00[AFR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6761082	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72970765	0.89[ASN][1000 genomes]
rs72976491	0.92[ASN][1000 genomes]
rs7558852	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7583743	0.83[EUR][1000 genomes]
rs7608152	0.85[EUR][1000 genomes]
rs996112	0.83[EUR][1000 genomes]

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:160908800-160917400	Weak transcription	NH-A	brain
2	chr2:160909000-160918200	Weak transcription	Aorta	Aorta
3	chr2:160909200-160917000	Weak transcription	HSMMtube	muscle
4	chr2:160909400-160917200	Weak transcription	Duodenum Mucosa	Duodenum
5	chr2:160909800-160917200	Weak transcription	NHEK	skin
6	chr2:160912000-160918000	Weak transcription	HMEC	breast
7	chr2:160912200-160917000	Weak transcription	Stomach Smooth Muscle	stomach
8	chr2:160912200-160917200	Weak transcription	HUVEC	blood vessel
9	chr2:160912200-160917600	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr2:160912200-160917800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr2:160912200-160917800	Weak transcription	Adipose Nuclei	Adipose
12	chr2:160912200-160917800	Weak transcription	Fetal Stomach	stomach
13	chr2:160912400-160916800	Weak transcription	Fetal Kidney	kidney
14	chr2:160912400-160917400	Weak transcription	Osteobl	bone
15	chr2:160912400-160917600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr2:160912400-160918000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr2:160912600-160917000	Weak transcription	Esophagus	oesophagus
18	chr2:160912800-160917600	Weak transcription	Rectal Smooth Muscle	rectum
19	chr2:160913600-160917200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
20	chr2:160913600-160918400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr2:160914400-160917200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr2:160914400-160917400	Weak transcription	NHDF-Ad	bronchial
23	chr2:160914400-160917600	Weak transcription	Ovary	ovary
24	chr2:160914400-160918400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
25	chr2:160914600-160916800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr2:160914600-160917000	Weak transcription	Fetal Intestine Large	intestine
27	chr2:160914600-160917800	Weak transcription	Fetal Intestine Small	intestine
28	chr2:160914600-160918200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr2:160914800-160916600	Weak transcription	Colon Smooth Muscle	Colon
30	chr2:160915000-160917600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr2:160915200-160917200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr2:160915800-160916400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
33	chr2:160916000-160917200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr2:160916200-160917000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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