Variant report

Variant	rs2692687
Chromosome Location	chr3:133628876-133628877
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:133627734..133631905-chr3:133632384..133636087,4	K562	blood:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1106735	0.89[ASN][1000 genomes]
rs1525885	0.83[ASN][1000 genomes]
rs1525887	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1525888	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1917779	0.81[CHD][hapmap];0.86[GIH][hapmap];0.89[YRI][hapmap];0.89[ASN][1000 genomes]
rs1917781	0.83[YRI][hapmap]
rs1949882	0.87[CHD][hapmap]
rs2030821	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2140920	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2140921	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2370638	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2692679	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2692682	0.93[CHD][hapmap];0.91[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.89[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2692686	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2692688	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2692689	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2692693	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2715612	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2715616	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2715617	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2715619	0.89[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2715620	0.89[YRI][hapmap];0.89[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2715630	0.93[CHD][hapmap];0.86[GIH][hapmap];0.89[YRI][hapmap];0.87[ASN][1000 genomes]
rs57405758	0.89[ASN][1000 genomes]
rs7610245	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7641134	0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs940898	0.90[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933605	chr3:133425907-133680641	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133616400-133635200	Weak transcription	Pancreas	Pancrea

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