Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1170622	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1170623	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1170624	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1170625	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1186066	0.82[ASN][1000 genomes]
rs2565770	1.00[ASN][1000 genomes]
rs2699363	0.96[ASN][1000 genomes]
rs707498	0.92[ASN][1000 genomes]
rs780020	0.90[ASN][1000 genomes]
rs780023	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs780024	0.88[ASN][1000 genomes]
rs780025	0.88[ASN][1000 genomes]
rs780026	0.99[ASN][1000 genomes]
rs780027	0.99[ASN][1000 genomes]
rs780028	1.00[ASN][1000 genomes]
rs780029	1.00[ASN][1000 genomes]
rs780030	1.00[ASN][1000 genomes]
rs780031	1.00[ASN][1000 genomes]
rs780032	0.97[ASN][1000 genomes]
rs780033	0.98[ASN][1000 genomes]
rs780034	0.94[ASN][1000 genomes]
rs780035	0.94[ASN][1000 genomes]
rs780040	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs780050	0.92[ASN][1000 genomes]
rs780051	0.82[ASN][1000 genomes]
rs780052	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs809053	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs810513	0.88[ASN][1000 genomes]
rs9646914	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874989	chr2:124892592-125176030	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:125024800-125028200	Weak transcription	Fetal Brain Male	brain
2	chr2:125025800-125041200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr2:125027200-125028800	Weak transcription	Right Atrium	heart

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