Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:103274516..103276734-chr7:103323210..103324865,2	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs2535756	0.95[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2535758	1.00[EUR][1000 genomes]
rs2535761	1.00[EUR][1000 genomes]
rs2535767	1.00[EUR][1000 genomes]
rs2535775	1.00[EUR][1000 genomes]
rs2535776	1.00[EUR][1000 genomes]
rs2535779	1.00[EUR][1000 genomes]
rs2535780	1.00[EUR][1000 genomes]
rs2535782	1.00[EUR][1000 genomes]
rs2711841	0.87[YRI][hapmap];0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2711855	1.00[EUR][1000 genomes]
rs2711856	1.00[EUR][1000 genomes]
rs2711857	1.00[EUR][1000 genomes]
rs2711858	1.00[EUR][1000 genomes]
rs2711859	1.00[EUR][1000 genomes]
rs2711866	1.00[EUR][1000 genomes]
rs2711868	1.00[EUR][1000 genomes]
rs2711872	1.00[EUR][1000 genomes]
rs28396636	1.00[EUR][1000 genomes]
rs28417002	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2906642	1.00[MEX][hapmap]
rs2907932	1.00[EUR][1000 genomes]
rs362657	1.00[EUR][1000 genomes]
rs362751	1.00[EUR][1000 genomes]
rs362775	1.00[EUR][1000 genomes]
rs3808024	0.82[ASW][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv491911	chr7:102967150-103403622	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv831085	chr7:103140672-103342388	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv427799	chr7:103250733-103454202	Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	esv1835816	chr7:103255144-103354223	Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv516122	chr7:103274567-103291825	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103271200-103276800	Weak transcription	NHLF	lung
2	chr7:103271200-103277000	Weak transcription	NHDF-Ad	bronchial
3	chr7:103273000-103276600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr7:103273000-103283600	Weak transcription	K562	blood
5	chr7:103273200-103276600	Weak transcription	HMEC	breast
6	chr7:103273800-103276800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr7:103273800-103276800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr7:103273800-103276800	Weak transcription	Osteobl	bone
9	chr7:103274200-103276800	Weak transcription	NH-A	brain
10	chr7:103274200-103277000	Weak transcription	HUVEC	blood vessel
11	chr7:103274400-103276600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr7:103274400-103277000	Weak transcription	NHEK	skin
13	chr7:103274400-103277400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr7:103274800-103276800	Weak transcription	Muscle Satellite Cultured Cells	--
15	chr7:103275800-103277000	Strong transcription	HepG2	liver

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