The 2.0 version of rSNPBase

Variant report

Variant rs2726895
Chromosome Location chr11:108767169-108767170
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:108726200-108768400 Weak transcription Primary B cells from peripheral blood blood
2 chr11:108728400-108810600 Weak transcription Left Ventricle heart
3 chr11:108760800-108767800 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr11:108762000-108767800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr11:108763000-108797600 Weak transcription Fetal Muscle Leg muscle
6 chr11:108764800-108767600 Enhancers ES-I3 Cell Line embryonic stem cell
7 chr11:108764800-108768000 Enhancers HUES64 Cell Line embryonic stem cell
8 chr11:108764800-108768200 Enhancers HUES48 Cell Line embryonic stem cell
9 chr11:108765000-108768000 Enhancers HUES6 Cell Line embryonic stem cell
10 chr11:108765000-108768400 Enhancers Hela-S3 cervix
11 chr11:108765600-108768600 Weak transcription K562 blood
12 chr11:108765800-108768000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr11:108765800-108768800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr11:108766000-108768200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr11:108766000-108768400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
16 chr11:108766200-108767400 Flanking Active TSS HUVEC blood vessel
17 chr11:108766200-108768800 Enhancers Cortex derived primary cultured neurospheres brain
18 chr11:108766400-108767200 Flanking Active TSS Osteobl bone
19 chr11:108766400-108767400 Enhancers iPS-18 Cell Line embryonic stem cell
20 chr11:108766400-108767400 Enhancers Primary hematopoietic stem cells short term culture blood
21 chr11:108766400-108768000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr11:108766400-108768000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr11:108766400-108768200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr11:108766400-108768400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
25 chr11:108766600-108767200 Enhancers Primary B cells from cord blood blood
26 chr11:108766600-108767200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr11:108766600-108767200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
28 chr11:108766600-108767200 Flanking Active TSS HMEC breast
29 chr11:108766600-108767400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr11:108766600-108767400 ZNF genes & repeats GM12878-XiMat blood
31 chr11:108766600-108767400 Enhancers NHDF-Ad bronchial
32 chr11:108766600-108767600 Enhancers HSMM muscle
33 chr11:108766600-108767600 Flanking Active TSS NH-A brain
34 chr11:108766600-108775600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr11:108766800-108767400 Enhancers Stomach Mucosa stomach
36 chr11:108766800-108768000 Enhancers NHLF lung
37 chr11:108766800-108769800 Weak transcription H1 Cell Line embryonic stem cell
38 chr11:108767000-108767200 Flanking Active TSS Primary monocytes fromperipheralblood blood
39 chr11:108767000-108767200 Flanking Active TSS Primary hematopoietic stem cells blood
40 chr11:108767000-108767200 Flanking Active TSS A549 lung
41 chr11:108767000-108767200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
42 chr11:108767000-108767400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr11:108767000-108767400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr11:108767000-108767800 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr11:108767000-108768000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr11:108767000-108768200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr11:108767000-108768200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr11:108767000-108768200 Enhancers NHEK skin
49 chr11:108767000-108768400 Enhancers Muscle Satellite Cultured Cells --
50 chr11:108767000-108777200 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015