The 2.0 version of rSNPBase

Variant report

Variant rs10890907
Chromosome Location chr11:108817015-108817016
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:108800800-108818000 Weak transcription HMEC breast
2 chr11:108805200-108829600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr11:108808800-108819000 Weak transcription HepG2 liver
4 chr11:108809600-108817600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr11:108809600-108819600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr11:108810200-108829000 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr11:108811400-108817800 Weak transcription Gastric stomach
8 chr11:108811400-108818400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr11:108811600-108818200 Weak transcription A549 lung
10 chr11:108811600-108819400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr11:108811800-108818200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr11:108812000-108817200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr11:108812000-108817400 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr11:108812000-108817600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr11:108812000-108818200 Weak transcription K562 blood
16 chr11:108812000-108818800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr11:108812000-108822200 Weak transcription Pancreas Pancrea
18 chr11:108812000-108823400 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr11:108812200-108818200 Weak transcription NHEK skin
20 chr11:108812200-108818400 Weak transcription Muscle Satellite Cultured Cells --
21 chr11:108812200-108818800 Weak transcription Ovary ovary
22 chr11:108812200-108828800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr11:108812400-108817400 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr11:108812400-108818200 Weak transcription NH-A brain
25 chr11:108812600-108818400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr11:108812800-108818200 Weak transcription Lung lung
27 chr11:108812800-108818800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr11:108813000-108817400 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr11:108813000-108818600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr11:108813000-108818600 Weak transcription Liver Liver
31 chr11:108813000-108819200 Weak transcription Primary B cells from cord blood blood
32 chr11:108813200-108817800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr11:108813400-108818600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr11:108813400-108818800 Weak transcription HUVEC blood vessel
35 chr11:108815000-108817600 Weak transcription HSMM muscle
36 chr11:108815000-108819000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr11:108815000-108819200 Weak transcription Primary T cells from cord blood blood
38 chr11:108815200-108819000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr11:108815600-108818400 Weak transcription Fetal Muscle Leg muscle
40 chr11:108817000-108817200 Enhancers Aorta Aorta

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Last update: Aug 31, 2015