Variant report

Variant	rs2804180
Chromosome Location	chr10:117308609-117308610
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 77 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:77)

rs_ID	r²[population]
rs10749177	0.91[YRI][hapmap]
rs10885744	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1389645	1.00[AMR][1000 genomes]
rs2182863	1.00[YRI][hapmap]
rs2245390	0.93[YRI][hapmap]
rs2247151	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2249822	0.91[YRI][hapmap]
rs2250353	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2250359	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2250609	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2250610	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2250738	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2251693	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2254124	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2255845	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2256064	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2263612	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2263613	0.93[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2420089	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2769372	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2769373	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2769376	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2769377	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs2769380	1.00[YRI][hapmap]
rs2769382	1.00[YRI][hapmap]
rs2769385	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2769404	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2769410	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2769411	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2769414	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2784802	1.00[YRI][hapmap]
rs2784805	1.00[YRI][hapmap]
rs2784807	1.00[YRI][hapmap]
rs2804173	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2804175	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2804181	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2804182	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2804191	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2804196	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2804203	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2804218	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2804219	1.00[YRI][hapmap]
rs2804222	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2804223	0.93[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2804243	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2804245	0.93[YRI][hapmap]
rs4391748	1.00[AMR][1000 genomes]
rs583175	0.91[YRI][hapmap]
rs585348	0.93[YRI][hapmap];1.00[AMR][1000 genomes]
rs597657	1.00[AMR][1000 genomes]
rs6585326	1.00[AMR][1000 genomes]
rs6585336	1.00[AMR][1000 genomes]
rs665750	0.93[YRI][hapmap]
rs675780	1.00[AMR][1000 genomes]
rs7072943	1.00[AMR][1000 genomes]
rs7077948	0.91[YRI][hapmap]
rs7078241	0.93[YRI][hapmap]
rs7081914	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs7086126	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs7086255	0.93[YRI][hapmap]
rs7097452	0.88[YRI][hapmap];1.00[AMR][1000 genomes]
rs7097962	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs7098914	1.00[YRI][hapmap];0.89[AFR][1000 genomes]
rs7098922	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7099169	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73371472	1.00[AMR][1000 genomes]
rs73371473	1.00[AMR][1000 genomes]
rs73371485	1.00[AMR][1000 genomes]
rs73373329	1.00[AMR][1000 genomes]
rs73373332	1.00[AMR][1000 genomes]
rs73373335	1.00[AMR][1000 genomes]
rs73373336	1.00[AMR][1000 genomes]
rs7901806	1.00[AMR][1000 genomes]
rs7911518	1.00[YRI][hapmap]
rs7912262	1.00[YRI][hapmap]
rs7920354	0.91[YRI][hapmap]
rs7921716	1.00[AMR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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