Variant report

Variant	rs4391748
Chromosome Location	chr10:117106667-117106668
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:117105039..117107956-chr10:117111600..117114129,2	MCF-7	breast:

Extended variants
information (count: 56 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:56)

rs_ID	r²[population]
rs12266550	1.00[EUR][1000 genomes]
rs1264760	1.00[EUR][1000 genomes]
rs1264766	1.00[EUR][1000 genomes]
rs1264779	1.00[EUR][1000 genomes]
rs1264790	1.00[EUR][1000 genomes]
rs1264792	1.00[EUR][1000 genomes]
rs1314595	1.00[EUR][1000 genomes]
rs1389645	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1494171	1.00[EUR][1000 genomes]
rs2182863	0.91[YRI][hapmap]
rs56812855	1.00[EUR][1000 genomes]
rs57278427	0.86[AFR][1000 genomes]
rs57996160	1.00[EUR][1000 genomes]
rs583175	1.00[YRI][hapmap]
rs585348	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs596330	1.00[EUR][1000 genomes]
rs597657	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs606534	1.00[EUR][1000 genomes]
rs60858345	1.00[EUR][1000 genomes]
rs612233	1.00[EUR][1000 genomes]
rs6585324	1.00[EUR][1000 genomes]
rs6585325	1.00[EUR][1000 genomes]
rs6585326	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6585334	1.00[EUR][1000 genomes]
rs6585336	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs665750	1.00[YRI][hapmap]
rs675780	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7071026	1.00[EUR][1000 genomes]
rs7072943	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7077948	1.00[YRI][hapmap]
rs7078241	1.00[YRI][hapmap]
rs7081737	1.00[EUR][1000 genomes]
rs7081914	0.92[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7086126	0.93[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7086255	1.00[YRI][hapmap]
rs7086259	1.00[EUR][1000 genomes]
rs7096083	1.00[EUR][1000 genomes]
rs7097452	1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7097962	0.93[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7100002	1.00[EUR][1000 genomes]
rs73365481	1.00[EUR][1000 genomes]
rs73371472	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73371473	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73371485	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73373329	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73373332	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73373335	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73373336	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs765492	1.00[EUR][1000 genomes]
rs7896862	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7901806	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7908792	1.00[EUR][1000 genomes]
rs7911518	0.89[YRI][hapmap]
rs7920354	0.81[YRI][hapmap]
rs7921716	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7923284	1.00[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117099800-117109200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr10:117105000-117113400	Weak transcription	Aorta	Aorta

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