Variant report

Variant	rs7097452
Chromosome Location	chr10:117251386-117251387
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 96 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:96)

rs_ID	r²[population]
rs10749177	1.00[YRI][hapmap];1.00[EUR][1000 genomes]
rs10885744	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1389645	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1494171	1.00[EUR][1000 genomes]
rs2182863	0.88[YRI][hapmap]
rs2245390	1.00[YRI][hapmap]
rs2247151	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2249822	1.00[YRI][hapmap]
rs2250353	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2250359	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2250609	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2250610	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2250738	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2251693	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2254124	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2255845	1.00[AMR][1000 genomes]
rs2256064	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2263612	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2263613	0.88[YRI][hapmap];1.00[AMR][1000 genomes]
rs2420089	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2420099	1.00[EUR][1000 genomes]
rs2420101	1.00[EUR][1000 genomes]
rs2769372	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2769373	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2769376	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2769377	0.87[YRI][hapmap]
rs2769380	0.88[YRI][hapmap]
rs2769382	0.88[YRI][hapmap]
rs2769385	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2769404	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2769410	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2769411	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2769414	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2784802	0.88[YRI][hapmap]
rs2784805	0.88[YRI][hapmap]
rs2784807	0.88[YRI][hapmap]
rs2804173	0.82[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2804175	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2804180	0.88[YRI][hapmap]
rs2804181	0.82[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2804182	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2804191	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2804193	1.00[EUR][1000 genomes]
rs2804196	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2804203	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2804218	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2804219	0.88[YRI][hapmap]
rs2804222	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2804223	1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2804243	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2804245	1.00[YRI][hapmap]
rs4391748	1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56812855	1.00[EUR][1000 genomes]
rs57278427	0.97[AFR][1000 genomes]
rs57996160	1.00[EUR][1000 genomes]
rs583175	1.00[YRI][hapmap]
rs585348	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs596330	1.00[EUR][1000 genomes]
rs597657	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs606534	1.00[EUR][1000 genomes]
rs60858345	1.00[EUR][1000 genomes]
rs612233	1.00[EUR][1000 genomes]
rs6585324	1.00[EUR][1000 genomes]
rs6585325	1.00[EUR][1000 genomes]
rs6585326	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6585334	1.00[EUR][1000 genomes]
rs6585336	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs665750	1.00[YRI][hapmap]
rs675780	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7071026	1.00[EUR][1000 genomes]
rs7072943	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7077948	1.00[YRI][hapmap]
rs7078241	1.00[YRI][hapmap]
rs7081914	0.87[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7086126	0.88[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7086255	1.00[YRI][hapmap]
rs7097962	0.88[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7098914	0.88[YRI][hapmap]
rs7098922	0.82[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7099169	0.88[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7100002	1.00[EUR][1000 genomes]
rs73365481	1.00[EUR][1000 genomes]
rs73371472	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73371473	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73371485	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73373329	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73373332	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73373335	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73373336	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7896862	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7901806	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7911518	0.82[YRI][hapmap]
rs7912262	0.88[YRI][hapmap]
rs7920354	0.85[YRI][hapmap]
rs7921716	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7923284	1.00[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117250600-117251600	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr10:117251000-117251400	Strong transcription	Aorta	Aorta
3	chr10:117251200-117252000	Weak transcription	Ovary	ovary

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