Variant report

Variant	rs7920354
Chromosome Location	chr10:117271561-117271562
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:117270127..117272329-chr10:117272470..117274118,2	MCF-7	breast:

Extended variants
information (count: 85 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:85)

rs_ID	r²[population]
rs10509994	0.82[JPT][hapmap]
rs10749177	0.90[YRI][hapmap]
rs10885744	0.91[YRI][hapmap]
rs12267242	1.00[CEU][hapmap];0.84[JPT][hapmap];0.84[EUR][1000 genomes]
rs12416148	1.00[CEU][hapmap]
rs1389645	0.88[AFR][1000 genomes]
rs17093128	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17093132	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17093149	0.82[JPT][hapmap]
rs17093214	1.00[CEU][hapmap];0.84[JPT][hapmap]
rs17093239	1.00[CEU][hapmap];0.84[JPT][hapmap]
rs17093257	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs17093273	1.00[CEU][hapmap];0.84[JPT][hapmap]
rs17093295	0.82[JPT][hapmap]
rs17093324	0.82[JPT][hapmap];0.84[EUR][1000 genomes]
rs17093329	1.00[CEU][hapmap];0.84[JPT][hapmap];0.84[EUR][1000 genomes]
rs17093331	1.00[CEU][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs17093333	1.00[CEU][hapmap];0.84[JPT][hapmap];0.84[EUR][1000 genomes]
rs17093335	1.00[CEU][hapmap];0.84[JPT][hapmap];0.84[EUR][1000 genomes]
rs17093399	1.00[CEU][hapmap];0.84[JPT][hapmap]
rs2182863	1.00[YRI][hapmap]
rs2245390	0.81[YRI][hapmap]
rs2247151	0.91[YRI][hapmap]
rs2249822	0.90[YRI][hapmap]
rs2250359	0.91[YRI][hapmap]
rs2250610	1.00[YRI][hapmap]
rs2251693	0.91[YRI][hapmap]
rs2263612	0.91[YRI][hapmap]
rs2263613	1.00[YRI][hapmap]
rs2420089	0.91[YRI][hapmap]
rs2769372	0.91[YRI][hapmap]
rs2769373	0.91[YRI][hapmap]
rs2769376	1.00[YRI][hapmap]
rs2769377	1.00[CEU][hapmap];0.84[JPT][hapmap];0.90[YRI][hapmap];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2769380	0.91[YRI][hapmap]
rs2769382	1.00[YRI][hapmap]
rs2769390	0.82[YRI][hapmap]
rs2769411	0.91[YRI][hapmap]
rs2784802	0.89[YRI][hapmap]
rs2784805	0.91[YRI][hapmap]
rs2784807	0.91[YRI][hapmap]
rs2804173	0.88[YRI][hapmap]
rs2804175	0.91[YRI][hapmap]
rs2804177	1.00[CEU][hapmap];0.84[JPT][hapmap];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2804179	1.00[CEU][hapmap];0.84[JPT][hapmap];0.85[EUR][1000 genomes]
rs2804180	0.91[YRI][hapmap]
rs2804181	0.88[YRI][hapmap]
rs2804182	0.91[YRI][hapmap]
rs2804191	1.00[YRI][hapmap]
rs2804196	0.91[YRI][hapmap]
rs2804203	0.91[YRI][hapmap]
rs2804219	1.00[YRI][hapmap]
rs2804222	0.91[YRI][hapmap]
rs2804223	0.81[YRI][hapmap]
rs2804243	0.89[YRI][hapmap]
rs2804245	0.81[YRI][hapmap]
rs4391748	0.81[YRI][hapmap];0.88[AFR][1000 genomes]
rs57278427	0.97[AFR][1000 genomes]
rs583175	0.90[YRI][hapmap]
rs585348	0.81[YRI][hapmap];0.94[AFR][1000 genomes]
rs597657	0.82[AFR][1000 genomes]
rs6585336	1.00[AFR][1000 genomes]
rs665750	0.81[YRI][hapmap]
rs675780	0.88[AFR][1000 genomes]
rs7072943	1.00[AFR][1000 genomes]
rs7077948	0.90[YRI][hapmap]
rs7078241	0.81[YRI][hapmap]
rs7081914	0.90[YRI][hapmap];1.00[AFR][1000 genomes]
rs7086126	0.91[YRI][hapmap];1.00[AFR][1000 genomes]
rs7086255	0.81[YRI][hapmap]
rs7097452	0.85[YRI][hapmap];1.00[AFR][1000 genomes]
rs7097962	0.91[YRI][hapmap];1.00[AFR][1000 genomes]
rs7098914	0.91[YRI][hapmap]
rs7098922	0.85[YRI][hapmap]
rs7099169	0.89[YRI][hapmap]
rs731928	1.00[CEU][hapmap];0.84[JPT][hapmap];0.84[EUR][1000 genomes]
rs73371472	1.00[AFR][1000 genomes]
rs73371473	1.00[AFR][1000 genomes]
rs73371485	1.00[AFR][1000 genomes]
rs73373329	1.00[AFR][1000 genomes]
rs73373332	1.00[AFR][1000 genomes]
rs73373335	1.00[AFR][1000 genomes]
rs73373336	1.00[AFR][1000 genomes]
rs7911518	0.88[YRI][hapmap]
rs7912262	0.91[YRI][hapmap]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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