The 2.0 version of rSNPBase

Variant report

Variant rs28364656
Chromosome Location chr6:119670819-119670820
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:119664800-119672400 Active TSS Brain Anterior Caudate brain
2 chr6:119665200-119672800 Active TSS Pancreatic Islets Pancreatic Islet
3 chr6:119666200-119672600 Active TSS NHDF-Ad bronchial
4 chr6:119666600-119672400 Active TSS Duodenum Smooth Muscle Duodenum
5 chr6:119667000-119672400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr6:119667000-119672400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
7 chr6:119667000-119672800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr6:119667200-119672200 Active TSS Brain Inferior Temporal Lobe brain
9 chr6:119667200-119672400 Active TSS Right Atrium heart
10 chr6:119667600-119672000 Active TSS Lung lung
11 chr6:119667600-119672000 Active TSS Pancreas Pancrea
12 chr6:119667600-119672200 Active TSS Brain Angular Gyrus brain
13 chr6:119667600-119672200 Active TSS Left Ventricle heart
14 chr6:119667600-119672200 Active TSS Rectal Smooth Muscle rectum
15 chr6:119667800-119672200 Active TSS Right Ventricle heart
16 chr6:119668000-119671600 Active TSS Liver Liver
17 chr6:119668000-119672000 Active TSS Gastric stomach
18 chr6:119668000-119672200 Active TSS Psoas Muscle Psoas
19 chr6:119668200-119672000 Active TSS Aorta Aorta
20 chr6:119668200-119672000 Active TSS Fetal Intestine Large intestine
21 chr6:119668200-119672200 Active TSS Fetal Intestine Small intestine
22 chr6:119668200-119672600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr6:119668200-119672600 Active TSS Rectal Mucosa Donor 29 rectum
24 chr6:119668400-119671800 Active TSS Sigmoid Colon Sigmoid Colon
25 chr6:119668400-119672000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr6:119668400-119672200 Active TSS Colon Smooth Muscle Colon
27 chr6:119668400-119672200 Active TSS Stomach Mucosa stomach
28 chr6:119668600-119672200 Active TSS Duodenum Mucosa Duodenum
29 chr6:119668800-119672000 Active TSS Ovary ovary
30 chr6:119668800-119672000 Active TSS Small Intestine intestine
31 chr6:119668800-119672200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
32 chr6:119669000-119672000 Active TSS ES-WA7 Cell Line embryonic stem cell
33 chr6:119669000-119672000 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr6:119669000-119672000 Active TSS Primary T killer memory cells from peripheral blood blood
35 chr6:119669000-119672200 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
36 chr6:119669000-119672400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr6:119669000-119672400 Active TSS Placenta Amnion Placenta Amnion
38 chr6:119669200-119671000 Bivalent/Poised TSS Foreskin Melanocyte Primary Cells skin01 Skin
39 chr6:119669200-119671800 Active TSS Thymus Thymus
40 chr6:119669200-119671800 Active TSS Spleen Spleen
41 chr6:119669200-119672000 Bivalent/Poised TSS Fetal Brain Female brain
42 chr6:119669200-119672200 Bivalent/Poised TSS Brain Cingulate Gyrus brain
43 chr6:119669200-119672200 Active TSS Brain Substantia Nigra brain
44 chr6:119669400-119671200 Active TSS Primary T regulatory cells fromperipheralblood blood
45 chr6:119669400-119671600 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr6:119669400-119671600 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
47 chr6:119669400-119671600 Active TSS HSMMtube muscle
48 chr6:119669400-119671800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr6:119669400-119671800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
50 chr6:119669400-119671800 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015