The 2.0 version of rSNPBase

Variant report

Variant rs6929286
Chromosome Location chr6:119617626-119617627
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:119590600-119621800 Weak transcription Placenta Placenta
2 chr6:119590800-119626600 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr6:119591000-119624200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr6:119592200-119622200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr6:119592400-119620800 Weak transcription Duodenum Mucosa Duodenum
6 chr6:119592400-119633600 Weak transcription Primary T cells from cord blood blood
7 chr6:119592600-119622200 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr6:119592600-119627200 Weak transcription Dnd41 blood
9 chr6:119593000-119622200 Weak transcription Primary T cells fromperipheralblood blood
10 chr6:119593000-119624800 Weak transcription Fetal Thymus thymus
11 chr6:119593000-119626800 Weak transcription Primary monocytes fromperipheralblood blood
12 chr6:119597200-119627400 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr6:119599200-119619400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr6:119599800-119632600 Weak transcription Spleen Spleen
15 chr6:119600000-119629000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr6:119600400-119624000 Weak transcription Fetal Stomach stomach
17 chr6:119602400-119629200 Weak transcription NH-A brain
18 chr6:119602600-119627400 Weak transcription Gastric stomach
19 chr6:119602600-119629000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr6:119602600-119635600 Weak transcription Esophagus oesophagus
21 chr6:119603400-119626800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr6:119604400-119626600 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr6:119605600-119622400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr6:119605600-119626600 Weak transcription GM12878-XiMat blood
25 chr6:119606200-119626800 Weak transcription Primary B cells from peripheral blood blood
26 chr6:119607200-119626800 Weak transcription Colon Smooth Muscle Colon
27 chr6:119607400-119624000 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr6:119607400-119626800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr6:119607600-119628600 Weak transcription Muscle Satellite Cultured Cells --
30 chr6:119609200-119626800 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr6:119609400-119622600 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr6:119609800-119620800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr6:119611200-119621800 Weak transcription Primary B cells from cord blood blood
34 chr6:119611400-119626600 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr6:119611400-119627400 Weak transcription Rectal Smooth Muscle rectum
36 chr6:119611800-119620800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr6:119611800-119622200 Weak transcription Fetal Kidney kidney
38 chr6:119611800-119627000 Weak transcription Fetal Lung lung
39 chr6:119614200-119629000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr6:119614400-119618400 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr6:119615200-119622200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr6:119615400-119632600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr6:119615600-119618200 Weak transcription Primary neutrophils fromperipheralblood blood
44 chr6:119616200-119619200 Enhancers Fetal Intestine Large intestine
45 chr6:119616200-119619800 Strong transcription K562 blood
46 chr6:119616400-119618000 Enhancers ES-I3 Cell Line embryonic stem cell
47 chr6:119616400-119630200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr6:119616600-119618000 Enhancers HUES64 Cell Line embryonic stem cell
49 chr6:119616600-119618000 Weak transcription Colonic Mucosa Colon
50 chr6:119616600-119618200 Enhancers Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015