The 2.0 version of rSNPBase

Variant report

Variant rs58157033
Chromosome Location chr6:119638500-119638501
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:119625200-119668600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:119627800-119667000 Weak transcription Gastric stomach
3 chr6:119632800-119647200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr6:119633000-119647200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr6:119634200-119647800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr6:119634400-119644000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr6:119634600-119644200 Weak transcription Fetal Intestine Large intestine
8 chr6:119634600-119647200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr6:119634800-119643200 Weak transcription Small Intestine intestine
10 chr6:119634800-119646600 Weak transcription Fetal Stomach stomach
11 chr6:119634800-119647000 Weak transcription Fetal Lung lung
12 chr6:119635800-119645600 Weak transcription Fetal Intestine Small intestine
13 chr6:119636000-119643000 Weak transcription Stomach Mucosa stomach
14 chr6:119636000-119647200 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr6:119636000-119661600 Weak transcription Colonic Mucosa Colon
16 chr6:119636200-119638800 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr6:119636200-119641000 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr6:119636200-119643000 Weak transcription Pancreas Pancrea
19 chr6:119636200-119643200 Weak transcription Lung lung
20 chr6:119636200-119643200 Weak transcription Right Atrium heart
21 chr6:119636200-119647200 Weak transcription Fetal Muscle Leg muscle
22 chr6:119636200-119647200 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr6:119636200-119647200 Weak transcription Spleen Spleen
24 chr6:119636200-119650800 Weak transcription Placenta Placenta
25 chr6:119636200-119661600 Weak transcription NHDF-Ad bronchial
26 chr6:119636200-119662000 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr6:119636200-119667400 Weak transcription Right Ventricle heart
28 chr6:119636200-119667800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr6:119636400-119647600 Weak transcription Rectal Smooth Muscle rectum
30 chr6:119636400-119647600 Weak transcription Stomach Smooth Muscle stomach
31 chr6:119636400-119656000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr6:119636600-119644400 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr6:119636600-119655800 Weak transcription Primary monocytes fromperipheralblood blood
34 chr6:119636800-119639400 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr6:119636800-119646800 Weak transcription Colon Smooth Muscle Colon
36 chr6:119636800-119647400 Weak transcription Monocytes-CD14+_RO01746 blood
37 chr6:119637000-119639000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr6:119637000-119639400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr6:119637000-119640800 Weak transcription Adipose Nuclei Adipose
40 chr6:119637000-119649000 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr6:119637200-119651200 Weak transcription Duodenum Mucosa Duodenum
42 chr6:119637200-119656600 Weak transcription Primary B cells from peripheral blood blood
43 chr6:119637400-119638600 Weak transcription Primary hematopoietic stem cells blood
44 chr6:119637400-119643400 Weak transcription Fetal Heart heart
45 chr6:119637400-119647200 Weak transcription Primary B cells from cord blood blood
46 chr6:119637400-119647200 Weak transcription Left Ventricle heart
47 chr6:119637400-119648200 Weak transcription GM12878-XiMat blood
48 chr6:119637600-119643200 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr6:119637800-119639400 Strong transcription HepG2 liver
50 chr6:119637800-119643000 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015